Gene Information

Name : PCC21_010090 (PCC21_010090)
Accession : YP_006645665.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1137395 - 1137919 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence :

ATGATATCTGACCACGCCACGCCCTCTGCTGAACTGACGCTCGAATCGCTCTATGGTTCGCATCACGGCTGGCTGAAGCA
CTGGCTAACGGGCAAGCTCCAATCCTCCTTTGACGCCGATGATATTGCTCAGGACACCTTCCTGCGCGTGATGAACGGCG
AGTCGCTGACCGCAATCCGCGATCCTAAATCGTTTCTATGTACCGTTGCCAAACGCGTGATGGTCGATCTCTTTCGCCGC
AATGCGCTGGAGATAGCCTATCTGGATAGGCTGGCGCAGTTGCCGGAGGCGCTTGCGCCCTCACCAGAGATCCAGCAACA
GCAGCTTGAGACGCTCCAGCAGGTGGATCTCATGCTCGACGGCCTGAGCCACAAAGCACGACAGGCGTTTTTGCTTTCCC
AGCTTGATGGCATGGCCTACGGCGAGATCGCCACACGGCTGAATGTCTCCATCAGTTCCGTCAAAAAATACGTTGCCAAA
GCCACGGAGCATTGCCTGCTGTTCCGTCTGGAGCACGGGCTGTGA

Protein sequence :

MISDHATPSAELTLESLYGSHHGWLKHWLTGKLQSSFDADDIAQDTFLRVMNGESLTAIRDPKSFLCTVAKRVMVDLFRR
NALEIAYLDRLAQLPEALAPSPEIQQQQLETLQQVDLMLDGLSHKARQAFLLSQLDGMAYGEIATRLNVSISSVKKYVAK
ATEHCLLFRLEHGL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-56	76

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PCC21_010090	YP_006645665.1	RNA polymerase sigma factor FecI	VFG1049	Protein	5e-57	76