Gene Information

Name : PCC21_014670 (PCC21_014670)
Accession : YP_006646123.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1687202 - 1689391 bp
Length : 2190 bp
Strand : -
Note : -

DNA sequence :
ATGCACAAACCGCAATTCCATACCATAAAACCACTGGCACTGATCGTTGCCGGACTACTCGGAGCACACTTAGGCACGGC
GCAGGCCGCCGACGAGGATGTGATGACCGTCAAAGCCACCGCCGAGCAGGAATTAAAACAGCAGCCAGGGGTATCGATCA
TCACGGCGGACGATATTAAAAAAGCACCGCCCGTTAACGATCTCTCCGACATTATCCGCAAAATGCCGGGCGTGAATCTC
ACAGGTAATAGCGCCACCGGAGCCAGAGGCAACAACCGCCAGATCGACCTACGCGGAATGGGGCCGGAAAATACGCTGAT
TCTTATTGATGGCCGTCCGGTGACCTCGCGTAACGCGGTTCGCTACGCCTGGGACGGCGAGCGGGATACCCGAGGCGATA
CGAACTGGGTACCGGTAGAAGAAGTGGAACGCATTGAGGTCATACGTGGCCCGGCTGCCGCCCGCTACGGTTCCGGTGCG
GCTGGCGGCGTGGTGAATATCATAACCAAGCGTCCATCCAACGTCTGGACCGGTTCACTCTCGCTGTACGGCAATCAGCC
AGAAAACAGCAAAGAAGGCGCCACACGCCGCGCCAATATCAACCTGAGCGGCCCGCTGGCCGATGATGTGCTCACCATGC
GCCTGTATGGCAATATCAATAAAACCGATTCTGACAGTTGGGATATCAACCGTAACCAGAACGGTTCTGCCGCGGCCGGC
CGTGAAGGCGTGCGCAATAAAGACCTCAACACGCTGCTGTCCTGGAAACTCTCACCACAGCAGATCGTTGATATTGAAGC
GGGCTATAGCCGCCAGGGCAATATCTATACCGGCGATACGCAGTTCAGCGGCGGAGGGGTAATCCCCGAAAGTCTGGCAA
AAAGCGGGGCGGAAACCAACCGACTGTATCGCCAGAATTATGCCATCACCCACAATGGAATTTGGGATTGGGGGCAATCC
AAGCTGGGCATCGCTTACGATCAAACGAATAACACCCGGCTTGACGAAGGATTGTATGGCCGTTTTGAAGGATCAATTAA
TAGCGATCGCTACAGCACCAGCCGCTTAAAAAATCTGCGTATTAACAGTGAGTTGAATATTCCACTTGAGCTTTGGGCCG
AGCAAACGCTCACACTGGGCGCAGAGTGGAATCGGGAGCAGTTAAACGATCCCTCCGCCAGCAGCTACCCAGGAGACAGC
CGCGACACCATTCCCGGTACATCCGTCAACCCTTCTCAGCGCAGCAGCAAAAATAGCGCCGAACTCAGTGCGCTCTATTT
TGAAGACAACATCGAAGTCGTACCCGGCACCAAAGTGATTCCCGGCCTGCGCTTCGATTATCACGATAAATTCGGCGGTA
ATTACAGCCCCAGCCTGAACATCCAACAGGAACTGGGCGAGATGTTCAGCGTGAAAGCGGGCATCGCGCGCGCCTTTAAA
GCACCAAATCTTTACCAATCCTCTACCGGTTATTTGCTTTATTCACGCGGTAACGGCTGCCCGTTCGGCGTAGATTATAA
TAACGGCGGCGGCTGCTATCTGGCGGGCAATGATAATCTGGATCCCGAGATCAGCGTCAACAAAGAAGTCGGGCTGGAGT
TCAAACATGCCGGCTGGCAGGCAGGTGTGACCTACTTCCGCAATGACTATAAAAACAAGATTGTTTCCGGTACCGATATT
CTTGGGCTGACGCAGTCAAATGCCGCGATCTTGCGTTGGGAAAATGGCGGTAAAGCGCTGGTAGAAGGGCTGGAAGCCAA
CCTGCTGGTGCCGGTGATTGACGACACGCTGGACTGGAGCACCAACGCCACCTATATGATTGAATCAAAAAATAAAGATA
CCGGTAACCCGCTGTCGATCATCCCGAAATACACCGTCAATACGATGCTGGACTGGCAGGCTACGGATAAACTGTCCGCC
AACGTCAGTTGGACGATGTACGGCAAACAAAAGCCGCGTCAGTACGCGACGAACCATATAGAGAGCCAGGCTGGTGGGCT
TTCCTCACGCGAAATCGGCAGCTACTCCGTTGCGGGTGTAGGGGTGAACTATCAGTTTAGCAAGAACCTGCGCGTCAATG
CGGGTATCAGTAACCTGTTTGATAAGCAGATTTATCGCGAGGCAAAAGGTGCGTCTACCTACAATGAACCGGGACGTGCC
TACTATGCGGGGGTCACCACCTCATTCTGA

Protein sequence :
MHKPQFHTIKPLALIVAGLLGAHLGTAQAADEDVMTVKATAEQELKQQPGVSIITADDIKKAPPVNDLSDIIRKMPGVNL
TGNSATGARGNNRQIDLRGMGPENTLILIDGRPVTSRNAVRYAWDGERDTRGDTNWVPVEEVERIEVIRGPAAARYGSGA
AGGVVNIITKRPSNVWTGSLSLYGNQPENSKEGATRRANINLSGPLADDVLTMRLYGNINKTDSDSWDINRNQNGSAAAG
REGVRNKDLNTLLSWKLSPQQIVDIEAGYSRQGNIYTGDTQFSGGGVIPESLAKSGAETNRLYRQNYAITHNGIWDWGQS
KLGIAYDQTNNTRLDEGLYGRFEGSINSDRYSTSRLKNLRINSELNIPLELWAEQTLTLGAEWNREQLNDPSASSYPGDS
RDTIPGTSVNPSQRSSKNSAELSALYFEDNIEVVPGTKVIPGLRFDYHDKFGGNYSPSLNIQQELGEMFSVKAGIARAFK
APNLYQSSTGYLLYSRGNGCPFGVDYNNGGGCYLAGNDNLDPEISVNKEVGLEFKHAGWQAGVTYFRNDYKNKIVSGTDI
LGLTQSNAAILRWENGGKALVEGLEANLLVPVIDDTLDWSTNATYMIESKNKDTGNPLSIIPKYTVNTMLDWQATDKLSA
NVSWTMYGKQKPRQYATNHIESQAGGLSSREIGSYSVAGVGVNYQFSKNLRVNAGISNLFDKQIYREAKGASTYNEPGRA
YYAGVTTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_014670 YP_006646123.1 hypothetical protein VFG1650 Protein 0.0 67
PCC21_014670 YP_006646123.1 hypothetical protein VFG0935 Protein 0.0 66
PCC21_014670 YP_006646123.1 hypothetical protein VFG0923 Protein 1e-149 50