Gene Information

Name : PCC21_021940 (PCC21_021940)
Accession : YP_006646850.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2480856 - 2481776 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAGAGAATAACGAGAACCTGCCCATTCCCTCTTTGAGGAATATTCAATCTTTCCTTCAGGTTGCCAATTGCAA
CAGTATAAATACTGCCGCAGAACAGCTTAACATCACGCCATCGGCCGTTAGTCATCAAATATCAACGCTTGAGCGATTTA
TCGGGAAGAAATTATTTATTCGCAATGGCAAGGGCGTTAAATTGACGTTAACCGGTGAGAAGTATTTGCGTGATGTATCT
GGCGCGATAAGCGAAATAGGGCGGGCAACAGATCAAATCATTAATGAAGGCGGGAAGGAAATCCTTCGCGTTCACTCCTC
GCCGACGTTTGGATTAACCTGGCTCATGAGACGGTTAGGTTATTTTAGAGATCAATATCCTGATATTACGCTAAATTTGA
CATGTTCTTATGAGAATCTTCAGTTCTCCCGTGACAATATCGACATTGATATCAGGCATGGTATAGCCGATTGGGATGCC
TATAAGGTATTGACGATAAAGAAAGACACGATGATTGTTATGGCATCCCCTGCATATTTAAAACAGCATCCGGTGATAAA
CCCAGAAGATTTGTTGACCTATGAACTCATTAGCTCAACAAGTACACTGATTAATTGGGATAAATGGTTCTCTTACCATA
ATTTATCCAAGTCACATATCAATCACAGCCTCAGCTTTGACCGTTCATTTATGAGTTTTGAAGCCGCAAAAATGGGATTG
GGTTTTATTCTGGAAAGTAAAATGTTAGGCACAGATTTCCTTCGTGAAGGTTCCCTGGTGCCTGTCCTTTCTGAAGATTA
TGCCATTCCTGTTAATGCACATCATATCGTCATGCCGCATGTGAATGAACGAACGCCAAAGATAAAAGCTTTCACTGACT
GGGTTCGTAAAGAACTCCAGACTAATGGATTTTCTATCTGA

Protein sequence : 
MKKENNENLPIPSLRNIQSFLQVANCNSINTAAEQLNITPSAVSHQISTLERFIGKKLFIRNGKGVKLTLTGEKYLRDVS
GAISEIGRATDQIINEGGKEILRVHSSPTFGLTWLMRRLGYFRDQYPDITLNLTCSYENLQFSRDNIDIDIRHGIADWDA
YKVLTIKKDTMIVMASPAYLKQHPVINPEDLLTYELISSTSTLINWDKWFSYHNLSKSHINHSLSFDRSFMSFEAAKMGL
GFILESKMLGTDFLREGSLVPVLSEDYAIPVNAHHIVMPHVNERTPKIKAFTDWVRKELQTNGFSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-70 46
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 5e-71 46
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-70 46
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-70 46
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 2e-70 46