Gene Information

Name : PCC21_021980 (PCC21_021980)
Accession : YP_006646854.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2485041 - 2486042 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGACAGCGCAGGCCAAACCTCGTTTAACGACATCCGCCATGATTGCCTCCATTGCCGATGAAGGTCAGGAAAC
GGTAGCGGCCCCCTTCGGTGTCGCACTGTCAAAACTCGCGGCAGAACGACGCGAAATCGTTGGCATGACGGCCGATTTGT
CCAAATACACCGATCTACATATTTTTGCTAACGCATTCCCAGAGCGCTTCTTTCAGATGGGGATGGCAGAACAGCTGCTA
ATGGGGGCGGCTGGCGGAATGGCAAAAGAAGGATTCATTCCATTTGTGACCACCTATGCGGTCTTTGCGACGCGTCGTGC
TTATGATTTTATCCATCAGGTCATTGCAGAAGAAAATCTGAATGTGAAGATTTGTGCCGCCCTACCAGGATTGACAACCG
GATACGGCCCGAGCCATCAGGCTACTGAAGATCTGGCAATCATGCGCGGTATTCCGGGGATGACGATCATTGATCCGTGC
GATGCGTTAGAGCTTGAGCAGGCCGTTCCAGCAATCGCAGAACATCAAGGCCCAGTCTACATGCGCTTACTGCGCGGAAA
AGTTCCACTTGTACTGGACAAATACGACTACACGTTTGAGCTGGGTAAAGCAAAGCTTCTGGAGGACGGTAATGATGTGC
TGATTATCTCTTCAGGACTGATGACAATGCGCGCGCTGGAGACAGCTGAAAAGCTACGTAAAGACAACGTCAGTGCGGCA
GTACTCCACGTTCCCACGATCAAACCGTTGGATGAGAAGACGATTCTTGCTCAAGCCGCTAAGCCCGGACGGTTGGTCAT
CATCGCCGAAAACCATACTTGTGTAGGTGGATTAAGCGAAGCCGTTGCCGCCCTGCTGATGCGCAAAGGCGTGCACTGTG
AACTGGATGTCATCGCATTGCCCGATGAGTTCTTGCATGCGGGTGCACTACCAACCCTGCACGATCGCTATGGTATTTCC
ACTGCGGCAATGGTAGAAAAAATCAAAAAACGCCTCGGTTAA

Protein sequence :
MSQTAQAKPRLTTSAMIASIADEGQETVAAPFGVALSKLAAERREIVGMTADLSKYTDLHIFANAFPERFFQMGMAEQLL
MGAAGGMAKEGFIPFVTTYAVFATRRAYDFIHQVIAEENLNVKICAALPGLTTGYGPSHQATEDLAIMRGIPGMTIIDPC
DALELEQAVPAIAEHQGPVYMRLLRGKVPLVLDKYDYTFELGKAKLLEDGNDVLIISSGLMTMRALETAEKLRKDNVSAA
VLHVPTIKPLDEKTILAQAAKPGRLVIIAENHTCVGGLSEAVAALLMRKGVHCELDVIALPDEFLHAGALPTLHDRYGIS
TAAMVEKIKKRLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 6e-88 76
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 7e-100 75
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 1e-114 74
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 3e-115 72