Gene Information

Name : PCC21_025870 (PCC21_025870)
Accession : YP_006647243.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2926318 - 2927025 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGATTTACCGTTATTGCAGTGTACTAATCTGTCGAAGCGCTATCAGGACGGCAAGCTGTCTACCGACGTGTTACG
CGATGTCTCATTTGAAATGAACAGCGGCGAGATGATGGCCATCGTCGGGAGTTCTGGCTCGGGCAAAAGTACGTTGCTGC
ATGTGCTGGGCGGGTTAGATACGCCGACGTCAGGTGAGGTTATCTTTAAAGGCCAGCCGCTGAATACGCTCTCAGCGGCG
GCAAAATCGGATTTACGCAATCGCGAGCTGGGCTTTATTTATCAGTTCCACCATCTGCTGCCGGATTTTACCGCGTTGGA
AAACGTCGCAATGCCGTTGCTGATTGGCAAAGTACCGACGTCACAGGCCCAGGATAAAGCTCGTGAAATGCTGGCGGCTG
TTGGGCTGGAAGCACGCAGCCACCACCGTTCATCGGAGTTGTCCGGTGGTGAACGGCAGCGTGTCGCCATTGCCAGAGCG
CTGGTTAATAGCCCGTCGCTGGTGCTGGCGGATGAGCCAACCGGTAACCTCGATCAGCGTACGACAGACACCATTTTTGA
ACTGCTGGGAGAGTTGAACGTCCGGCAGGGCACCGCCTTTCTGGTGGTGACGCATGACCTGCAACTGGCTAGCCGACTGA
ACCGTCAACTGGAAATGCGTGACGGTCAGTTGCAGAAGGAACTGACCCTGATGGGAGCGCGGCAATGA

Protein sequence : 
MSDLPLLQCTNLSKRYQDGKLSTDVLRDVSFEMNSGEMMAIVGSSGSGKSTLLHVLGGLDTPTSGEVIFKGQPLNTLSAA
AKSDLRNRELGFIYQFHHLLPDFTALENVAMPLLIGKVPTSQAQDKAREMLAAVGLEARSHHRSSELSGGERQRVAIARA
LVNSPSLVLADEPTGNLDQRTTDTIFELLGELNVRQGTAFLVVTHDLQLASRLNRQLEMRDGQLQKELTLMGARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_025870 YP_006647243.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 3e-42 46
PCC21_025870 YP_006647243.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 1e-37 46
PCC21_025870 YP_006647243.1 lipoprotein transporter ATP-binding subunit CP001581.1.gene798.p Protein 2e-36 41
PCC21_025870 YP_006647243.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686946. Protein 1e-22 41