|
Name : PCC21_032250 (PCC21_032250) Accession : YP_006647881.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Unknown Product : ImpA family type VI secretion-associated protein Function : - COG functional category : - COG ID : - EC number : - Position : 3645985 - 3648021 bp Length : 2037 bp Strand : - Note : - DNA sequence : GTGGCAAACAGTACAGGATTACAGTTCACCGTAAAGGTCGGTGCCCTGGAAGCAGGCACTTTCGCGGTGGTGGATTTCAG GCTGGATGAAGGGCTGAACCGGCCTTTCAGCCTGTCGCTGAGTCTGGCGAGTGCGTTGCCGGATGTCGATTTCGGCGTGG TGCTGGACCAGCCGTGCGAGCTGATGATTTGGTATGAAGGCGAACTGAAACGTCGGGTCAGCGGAATTATCAGCGGCTTT ACGCAGGGTGACACCGGATTCCGGCGCACGCGCTATCAGATAGAGGTCCGTCCTGCCCTGTGGCGACTGGGATTACGCAC CAACGCCCGCATCTTTCAGGCGCAAAAGCCGGAAGCGATTATCGGGGCGCTGCTGGAAGAAGCCGGTATCACCGACTACG CCTTTGCGCTGCGTAACGAGCATGCGGTACGGGAATACTGCGTGCAGTATCGGGAAAGCGATTTAGCCTTTATCACCCGG CTGGCCGCCGAGGAGGGCATATATTTCTTCCACGAATACGAAGAGGGTAAACACCGGGTGGTGTTTGCTGACGATGCGGG CGCACTGACCAAAGGCCCCGAGCTGTTCTTCAATCTGGCGACGCAGGGGCTGAGTGAGGGCGAATATGTCCGGCGCTTCC ACTACGCGGAGCGGGTGAGTACGGCCGAAGTCGAGCTGAAAGACTACAGCTTCAAGACACCGGCTTACGGGCTGTCGCAC AAGAAAATGAGTGGCGAGCTGGCGCACCAGCGCGAAAGCTACCAGCATTACGACTACCCGGGGCGCTATAAGCAAGACCC GAGTGGTAAGGCGTTCAGCGGCTACCGGCTGGATGCGCTGCGCTCAGGGGCGGTGACGAGCGAAGGGGAATCCAACTGTG CGGGGCTGATGCCGGGTAACACCTTCACGCTGACGGAGCACCCGAATGCGACGCTGAATGCGGTGTGGCAGACGGTGAGC GTGACGCACGTCGGGCAACAGCCGCAGGCGCTGGAAGAGGAAAGCGGCGGCGAACCGACGACCATGAGCAACAGTTTTGC GGTGGTGAAAGGGACAACGACGTGGCGTGCTGCCATGCCTTACAAACCGATGGTGGACGGGCCACAAATCGCCACCGTCG TCGGCCCAACGGGAGAAGAAATCTACTGCGACCCGTATGGTCGGGTAAAACTACAATTCCCGTGGGATCGCTACGGTGCG AGTAATGACCAGAGTTCCTGCTGGGTGCGCGTCAGTCAGGGCTGGGCGGGTGGCCAGTACGGCATGATTGCCATCCCGCG TATCGGTCATGAAGTGATCGTCAGCTTCCTTGAAGGCGATCCGGACCAGCCGATTGTCACCGGGCGTACTTTCCACGCCA CCAACCCGACGCCGTACGTTTTACCGGCACATAAAACGCGTACCACGCTTCGTACCGATACGCATAAAGGTAGTGGCTTC AACGAACTGCGTTTTGAGGATGAGGCGACGCGTGAACAGATTTACTATCACGCTCAGAAAGATATGGATGGTGTTATCAA CAACATCCACCGGCAGAGCGTAGGGCGCGATCAGCACCTCAGCGTGGATCAGGATCAGTTCCAACGGGTCACGCGTCACC GCCACCGAACGATAGGCAAGGATGATTTTGAAAACATCGGTCAGGATCATCACCAGGAAATTGGCCGGAGTTTTATTCAG AAAATTGGTGCGTCGTTCAAACGTTTCATCGGTGGGGGGGAGATTACCCGTATCGAAGGGAGCCGTCAGACCACGATGTC TGGTTCTGAAGAGACGCTGATCGGCGCGCACCAGCGCGTTCTGGTGAATACGGACAGCTACCTGAAAGCTGCGGATATCG TGCTGGAAGCGGGGCAGGCACTGACCATCAAAGGGCCTGGCGGCTTTATCAAGATTGATAGCGCGGGTGTCACAATTTCC GGGACGATTGTGAAAATCAACGATGGCGGTGCGGCTGGCGTAGGGACTGCGCCAGTATCCATTACGCCAGAAGATCCGAC GAAGCCTACGCTGCCCGATGCGCCAGACAGACGTTAA Protein sequence : MANSTGLQFTVKVGALEAGTFAVVDFRLDEGLNRPFSLSLSLASALPDVDFGVVLDQPCELMIWYEGELKRRVSGIISGF TQGDTGFRRTRYQIEVRPALWRLGLRTNARIFQAQKPEAIIGALLEEAGITDYAFALRNEHAVREYCVQYRESDLAFITR LAAEEGIYFFHEYEEGKHRVVFADDAGALTKGPELFFNLATQGLSEGEYVRRFHYAERVSTAEVELKDYSFKTPAYGLSH KKMSGELAHQRESYQHYDYPGRYKQDPSGKAFSGYRLDALRSGAVTSEGESNCAGLMPGNTFTLTEHPNATLNAVWQTVS VTHVGQQPQALEEESGGEPTTMSNSFAVVKGTTTWRAAMPYKPMVDGPQIATVVGPTGEEIYCDPYGRVKLQFPWDRYGA SNDQSSCWVRVSQGWAGGQYGMIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPTPYVLPAHKTRTTLRTDTHKGSGF NELRFEDEATREQIYYHAQKDMDGVINNIHRQSVGRDQHLSVDQDQFQRVTRHRHRTIGKDDFENIGQDHHQEIGRSFIQ KIGASFKRFIGGGEITRIEGSRQTTMSGSEETLIGAHQRVLVNTDSYLKAADIVLEAGQALTIKGPGGFIKIDSAGVTIS GTIVKINDGGAAGVGTAPVSITPEDPTKPTLPDAPDRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 8e-141 | 46 |
