Gene Information

Name : PCC21_032350 (PCC21_032350)
Accession : YP_006647891.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3662686 - 3664023 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
ATGTCGAGTCGCAATCGCATTATCTGGCGGGAAGGTCTGTTCATTAAACCGCAGCATTTTCAACAACAGCAAAGACACAC
CGATTACGCACTGCACGCGCGTCTCAGCGCCCTCAGTGACTATTTCTATGGCTTGCAGTCGCTGGCGATTAATGAGGAAT
ACCTCAATTTTGGCCGCATCGCGCTGGTTAACGCCAGCGGCGTGATGCCGGACGGCACTGTGTTCAATATTCCGGGCGAC
GACGCCCTGCCGCTGCCGTTGGAGATTACCGACGTCGCGCTGGCAAACCAGAAAGTGTATCTGGCGCTGCCGCTGGCGGT
AAATGGCGTCAGTGAAGTCGGTCAGCCGGGGCAGGGGATCGCCAGCCGCCTGCAATCGCACCGGCATGACGTGCGCGACC
TGCACAGCGACGGCGGCGATATCGTTTCTCTGGAAGTCGGAAAAGTCAGCCTGCGCCTGATGCTCGATCGTGACGATCGC
AGCGCCTATGCCTCGCTGGCGATTGCCAACATTCTGGATAAACGCCCTGACGGCGGCTTGATTCTGGATCCTAACTTCAT
GCCGTGCAGTATCAGCGTTACCGCGATCCCTACCTTAAAACGCTTTTTGGGGGAATCCGCCGGTCTGGTGGCGGAACGCG
CGCGCAGTCTGGCGCAGCGTATTGCCGCACCGGGACAGCAGGGCGTCGCGGACGTGGCCGAATTTATGATGCTGCAATTG
CTTAACCGCGCGCAGCCCAAGCTGTCGCATCTGGCGCGCCTTGGCACGTTGCACCCTGAACGCCTGCACGAAACGCTGGT
TGAGCTGTGTGGCGAGCTGATGACGTTTACCGATGAGTCGCGTCTGCCGCCTGAATTCCCCGCCTATCGTCACGAACACC
AGCAGGCCAGCTTTGAGCCGCTGATGATGTCACTGCGTCAGGCGCTGAGCACCGTGCTGTCGCCGCGCGCCGTCTCCATC
CAACTGAAGAAACAGCCGTATGGCGTGATGGTGGCGATGGTTGGCGATGCGGAATTGATGGCCAGCGCCGAGTTTGTCCT
GGCGGTGCGTGCGCGTATGCCGCAGGAGCATCTGCGTAAACAGCTGCTGCAACAAACGAAGATCGCCTCCAGCGAGAAGA
TCCGCGAACTGATCAGCCTGCAATTGCCGGGTATCCCGCTGCTGCCGCTGCCGGTTGCGCCGCGCCAGCTGCCTTATCAC
GCGGGCTACAGCTATTTCCAACTGGATAGACAAAGCCCCGCCTGGCAGGTGCTGGTGTCTGGCAACACGCTGGCGTTCCA
CATTGCTGGCGAATTCCCGGAACTGGATATGCAGCTTTGGGCTATCCGTGGGCAGTAG

Protein sequence :
MSSRNRIIWREGLFIKPQHFQQQQRHTDYALHARLSALSDYFYGLQSLAINEEYLNFGRIALVNASGVMPDGTVFNIPGD
DALPLPLEITDVALANQKVYLALPLAVNGVSEVGQPGQGIASRLQSHRHDVRDLHSDGGDIVSLEVGKVSLRLMLDRDDR
SAYASLAIANILDKRPDGGLILDPNFMPCSISVTAIPTLKRFLGESAGLVAERARSLAQRIAAPGQQGVADVAEFMMLQL
LNRAQPKLSHLARLGTLHPERLHETLVELCGELMTFTDESRLPPEFPAYRHEHQQASFEPLMMSLRQALSTVLSPRAVSI
QLKKQPYGVMVAMVGDAELMASAEFVLAVRARMPQEHLRKQLLQQTKIASSEKIRELISLQLPGIPLLPLPVAPRQLPYH
AGYSYFQLDRQSPAWQVLVSGNTLAFHIAGEFPELDMQLWAIRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-91 47
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 5e-91 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_032350 YP_006647891.1 hypothetical protein VFG2082 Protein 1e-132 61
PCC21_032350 YP_006647891.1 hypothetical protein VFG2065 Protein 4e-90 44