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Name : PCC21_006360 (PCC21_006360) Accession : YP_006645292.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : RNA polymerase ECF-subfamily sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 716438 - 716980 bp Length : 543 bp Strand : - Note : - DNA sequence : ATGTCATCAGCCAATATTGATACCTCAGCAGATCTGCATCAGCTTTATTGTCAGCATCACGGCTGGCTGCAAGGGCTATT GCGCAAACGACTGGGGAATCTGTGTGATGCGGCCGATCTGGCGCAGGATGTATTTTTACGGCTGTTGCTGAAACCGCGCC AGTTCGACAGCCACGCAGGCGCGCGGGCTTACCTGAGCGTGATGGCGCAGGGCATGTGCGTCGACCTCTGGCGCAAACGG GAAATTGAGCGCGTCTGGCTCACTTCATTAGCCGAACAGCCGGAGTCGGTTGCCCTGTCGGCGGAAGACAGTAACATCAT TCTCGAAACGTTATATCAAGTTGATGCCATGCTGCGTGCGCTGCCAGAGAAGGTGCGTGCCGCCTTTATCATGGCGCAGG TTCAGGGATTACCCTATCGGGAAATTGCTACGGCGCTGGGCGTTTCCGAACGCATGGTGAAAAAATACATGGCGCAGGCC ATGCTGCACTGTGTACTGCTGGAAGCGGAGATAGACGCGGACGGTCAGGCCGCTCATTCATGA Protein sequence : MSSANIDTSADLHQLYCQHHGWLQGLLRKRLGNLCDAADLAQDVFLRLLLKPRQFDSHAGARAYLSVMAQGMCVDLWRKR EIERVWLTSLAEQPESVALSAEDSNIILETLYQVDAMLRALPEKVRAAFIMAQVQGLPYREIATALGVSERMVKKYMAQA MLHCVLLEAEIDADGQAAHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_006360 | YP_006645292.1 | RNA polymerase ECF-subfamily sigma factor | VFG1049 | Protein | 8e-26 | 42 |
