Gene Information

Name : BPC006_II0150 (BPC006_II0150)
Accession : YP_006657012.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : chaperone clpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 143082 - 145811 bp
Length : 2730 bp
Strand : +
Note : -

DNA sequence :
TTGCACGAGACGAAACCGGATAGGGGACGCGATTTTCCGGTTTTGTGTGCAAACGTCGCATATTCACGAATTCACGATCG
AGACATGACAGTTTCAAGACAGGCACTATTCGGCAAGCTCGGCTACTCGCTGTTTCGCAGCATCGAATCGGCGACGGCGT
TCTGCAAGCTTCGCGGCAACCCTTACGTCGAGCTGGTGCATTGGCTGCATCAGATGCTTCAGGCCGCTGACGGCGATATG
CAGCGGATCGCTCGCCACTGCGACATCGACCTCGGCGAGCTGGAGCGCGACATGGTGCGCGCGCTCGGCGAACTGCCGGC
GGGCGCGAGCTCGATCAGCGATTTCTCGCACCACATCGAGACGGCGATCGAGCGCGCGTGGGTGCTGGCGACACTGGACT
TCGGCGATCGCCGGATTCGCGGCGCGTGGCTACTGGCTGCGTTGCTGAAGACGCCGGAGCTCAGGCGCGTACTGCTGTCG
ATTTCGTCCGCGTTCGGCCGGATTCGTGTCGACGAACTGGATGCGATGTTGCCGGCCTGGATCGACGGCTCGCCCGAGGC
GAACGAGACGCCGTACGACAACAGCGACTTCGGCGCGGCCATACCGGGCGAGGCGTCGAGCGCGATGCAGCAAAAGGGCG
GCGGTTCACCGCTGGAGCAGTTCTGCCTCGACCTCACCGCGCGAGCGCGAGCGGGGCAGATCGATCCGGTCGTCGGTCGT
GAGCTGGAAATCCGCACGATGATCGACGTCCTGTTGCGCCGCCGCCAGAACAACCCGCTGCTGACGGGCGAGGCGGGTGT
GGGCAAGACGGCCGTCGTCGAAGGGCTCGCGCGCGCGATCGCCGCCGGCGATGTGCCGCCGAAGCTTGCCGATGCGCGCC
TGCTGAGCCTCGATGTCGGCGCGCTGTTGGCCGGGGCGAGCATGAAGGGCGAATTCGAGGCGCGCCTGAAAGGCGTGCTG
GAGGCGGCGGCGAAAGCGACGCTGCCCGTCATTCTGTTTGTCGACGAGATTCACACGCTGATCGGCGCGGGCGGCCAGGC
GGGCACCGGAGATGCCGCGAACCTGCTCAAGCCCGCGCTCGCGCGCGGCACGCTGCGAACGATCGGTGCGACGACGTGGG
CGGAATACAAGCGGCACATCGAAAAGGATCCGGCGCTCACACGCCGCTTCCAGGTGTTGCAGGTTCCCGAGCCCGACGAG
GCGGCCGCGATCGACATGGTTCGAGGGCTGACGCGAACCTTCTCGCGTCATCATGGCGTCGTCGTGCTGGACGAGGCGAT
TCGCGCGGCGGTCAAGCTGTCGCATCGCTACATTCCATCCCGTCAGTTGCCGGACAAGGCGATCAGCCTGCTCGATACGG
CGTGCGCGCGCGTCGCGTTGTCGCAGCATGCGCCGCCGCGTGAGCTGCAGGACGTCCGCAGAAGATTGGAGGCCGCGAGG
GTGCGGCTCGAATTGCTCGACGGCGAGCAGCGCATCGGCCTTGGCGACGAAGCCGCGCTCGCGCAGTCTCGCGCGGAAAT
CGCCGCGCTCGAGGTGGAGGAGCAATCGATCGACGCTTGCTGGCGGCAGCAGATCGAGGCCGCGCAGACGCTGCTCAGCG
CGCGCGAGGCGGCGGGCGACGCTGCGGCGAGCGCGATCGACGCGCTGCGCGAGCTGGAGCATGCGCTGTCGAACCTGCAA
GGCGATCACGCGTTCGTTTTCCCCGAGGTCAACGAAGCGATCGTCGCGGAGATCATGTCCGACTGGACCGGCATTCCGGT
CGGCAGGATGGTGACGGACGAAGTGTCCGCCGTGCGCGCCTTGCCGGACACGCTCGCCGCCCGCGTGATCGGTCAACGCG
ATGCGTTGCATCAGATTGGCGATCGGGTGCAAACGGCGCGCGCCGGATTGACCGATCCGAAGAAGCCGCTCGGCGTGTTC
CTGCTCGCGGGGCCGTCGGGCGTCGGCAAGACGGAGACGGCATTGGCGCTTGCCGAGGCGCTGTACGGCGGCGAGCAGAA
TCTCATCACGATCAACATGAGCGAATATCAGGAGGCGCATACGGTATCGGGGCTGAAGGGCGCCCCGCCGGGTTACGTCG
GATACGGCGAGGGCGGCGTGCTGACCGAGGCGGTGCGCAGGCGTCCGTATTCCGTCGTGCTCCTCGACGAGATCGAGAAG
GCGCATCCCGACGTCCACGAGATGTTCTTCCAGGTATTCGACAAGGGCTACATGGAGGACGGCGACGGGCGCTATATCGA
TTTTCGCAACACGACGATTCTTCTCACCAGCAATGCAGGCTCCGACCTCGTGTCCGGACTGTGCATGGACGAGGCTTGCG
CCCCCGACGCGGACGGCCTTTGCGCCGCGCTCGCTTCCGAATTGCTCAAGACGTTTCCCGCGGCGTTTCTCGGGCGCGTG
ACGCTGGTGCCCTATCGTCCGCTCGCGCAGGAAACGCTATCGCGCATCGTCCGGCTGCATCTGGACCGAGTGGTGACGCG
AATGGCCGAGAATCAGGCTGTCGCCCTGCGTTATTCGGACAATGTCGTCGATTACGTCGTCAACCGCTGCCTCGTGCAGG
AAACGGGGGCGCGCTTGCTGATCGGCTTCATCGAGCAGCACGTGTTGCCGCTGCTCGCGAAGCTTTGGCTGGATTCGCTT
GCGTCCAAGCACGTGCTGACACGCGTCGACCTCGACATGGCCGATCCCGCCGCGGCCCCGGCCGAAGCGTTCGCGCTGCG
CGCTTCATGA

Protein sequence :
MHETKPDRGRDFPVLCANVAYSRIHDRDMTVSRQALFGKLGYSLFRSIESATAFCKLRGNPYVELVHWLHQMLQAADGDM
QRIARHCDIDLGELERDMVRALGELPAGASSISDFSHHIETAIERAWVLATLDFGDRRIRGAWLLAALLKTPELRRVLLS
ISSAFGRIRVDELDAMLPAWIDGSPEANETPYDNSDFGAAIPGEASSAMQQKGGGSPLEQFCLDLTARARAGQIDPVVGR
ELEIRTMIDVLLRRRQNNPLLTGEAGVGKTAVVEGLARAIAAGDVPPKLADARLLSLDVGALLAGASMKGEFEARLKGVL
EAAAKATLPVILFVDEIHTLIGAGGQAGTGDAANLLKPALARGTLRTIGATTWAEYKRHIEKDPALTRRFQVLQVPEPDE
AAAIDMVRGLTRTFSRHHGVVVLDEAIRAAVKLSHRYIPSRQLPDKAISLLDTACARVALSQHAPPRELQDVRRRLEAAR
VRLELLDGEQRIGLGDEAALAQSRAEIAALEVEEQSIDACWRQQIEAAQTLLSAREAAGDAAASAIDALRELEHALSNLQ
GDHAFVFPEVNEAIVAEIMSDWTGIPVGRMVTDEVSAVRALPDTLAARVIGQRDALHQIGDRVQTARAGLTDPKKPLGVF
LLAGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEK
AHPDVHEMFFQVFDKGYMEDGDGRYIDFRNTTILLTSNAGSDLVSGLCMDEACAPDADGLCAALASELLKTFPAAFLGRV
TLVPYRPLAQETLSRIVRLHLDRVVTRMAENQAVALRYSDNVVDYVVNRCLVQETGARLLIGFIEQHVLPLLAKLWLDSL
ASKHVLTRVDLDMADPAAAPAEAFALRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II0150 YP_006657012.1 chaperone clpB VFG2076 Protein 0.0 54
BPC006_II0150 YP_006657012.1 chaperone clpB VFG2084 Protein 8e-123 41