Gene Information

Name : BPC006_II2773 (BPC006_II2773)
Accession : YP_006659620.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : Rhs element Vgr protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2799866 - 2802070 bp
Length : 2205 bp
Strand : -
Note : -

DNA sequence :
GTGAGTCGCGTATTCACACTCGACAGCCCGCACGGCGACGGCCTGAAATTCCACACGCTCGACGGCAGCGACGAACTCGG
CCGGCTGTTCGAATTCCGGATCGAGGCGCTCGCCGACAGTCACAGCCTGTCGCTGAAGGACCTGCTCGGCAAGCCCGTCA
CCGTCCGGATCGAACAGCAGGGCCAGTCGACGCGCTACCTGAACGGCATCGTTGCGCGCGCATCGCTTGCCGGCCGGCGT
GCCGAGCGGTACTACGGCTACGAGCTGCTCGTGCGGCCATGGCTGTGGCTCGCGACGCGTCGCTCCGATTGCCGGATATT
CCAGAACAAGACCGTGCCCGAGATCGTGCAGGAGGTGCTGTCGACGTACGGCTTTCCGATCGAGAACCACCTCGCCGAAT
CGTATGTGCCGCGCGAGTATTGCGTGCAGTACAACGGGACCGATGCCGCGTTCGTGTCGCGGCTGATGGAATTCGAGGGC
ATCTACTACTGGTTCCGGCATGCCGAGGACACGCATACGCTGATGCTGAGCGACGCGATGTCGTCGCATACGGCGCTGCC
CGGCTACGAAACGATTCCGTACATCGCGCGCGACCGCACCGTGATCGCCGACGTGGAACATATCGACGGCTGGCTGCCCG
CGCGACAGGTGAGCGTCGGCAAGCATCAGACCACCGACTACGACTACACGAAACCACGCGCCGATCTGTCGTCGCAGAAG
GTCGATCCGCGCGGCCACGATCACGACAGCTTCGCGTCGTTCGAATGGCCGGGCGGCTATCGCGACGATGCGCCCGGCGC
GCACTACAGCCGCGTGCGGCTCGAAGAACAGCAGGCCGAGCACGAACGCGCGAGCGCCGATACGGATGTGCGCGGCGCCG
CGCCGGGGTATCTGTTCACGCTCGCGCATTGCCCGCGCGCCGACCGGAACCGCGAGTACCTGATCGTGCGGTGCCAGTAC
CGTTTTCAGGAGAACGCGTATGCGAGCGATCAGGGCACGGAGGCTGTGGTGCATCAGACGATGATGCTCGTGCGGCCGTC
GAGTTTGCCTTATCGGTCGCCGCGTGAGACGCCGAGACCGCGGACCAACGGGCCGCAGACGGCGACCGTTGTCGGGCCGC
CCGGTGAGGAAATCTGGACCGATCAGTACGGGCGCGTGAAGCTGCAGTTTCGCTGGGACAGGTATGGGCAGAGCAACCAG
GATTCGTCGTGCTGGGTGCGGGTGTCGAGCCCGTGGGCGGGCGGTGGATTCGGAGGCGTGCAGATTCCGCGTGTGGGCGA
CGAGGTCGTGGTCGATTTTCTGAACGGCGATCCGGATGAGCCGATCGTGACGGGGCGCGTTTATAACGGCGAGCGGATGC
CGCCGTGGGGGCTGCCGGGGAGTGCGACGCAGAGCGGGCTGTTGTCGCGGTCGTCGCCGGGCGGGACGACCGAGCATGCG
AACGCGTTTCGCTTCGAGGACAAGAAAGGCGCGGAACAGTTGTGGATGCACGCGGAGCGGAATTTCGACGCGGAAACGGA
GGCCGATCATTCGCTTTCCATCGAGCACGACCACACGCATACGGTCGGCAACGACGAAACGATGCAGGTGAGGAACAACC
GGCAACGCAGCGTCGGGCAGGACGAGACGGTGAACATCGGGCGGCATCGGGTCGCGCAGATCAAGGGGAATGAGACGCAG
GGGGTGGTGGGGGATCGCACGCGCACGGTCGGGAAGAAGGAGACCGTGACGATCGTGTCGGATCGCGAGGCGACGATCGG
CGGCAATCACATGGAGACGGTCGTGAAAGACAAGACCGAATCGATCGGCGAGGGCAAGACGCTGAATGTCGTCAAGCACT
ATCAGACGAATTCGAAAAGCATGAAGACGACGGTCGCTGAACATCATGTGGAGGAGATCGGTGAGCGGACGTCGACGATT
GCACACGCGCATACGCTCACGGTCCGCGGCGAACACGCCGTCAGCGTCGGCGCAAACCACACGACGAACGTGCAGCATCA
GGTGCTCGTCAATGCCGGCGACCAGCGTGCGCTCGTGTGCGGGAAGTCGAGCGTCCTGATGAAGAGCGACGGCACGATCC
TGATCCAGGGTGTCAACGTCGAATCAAGCGGCTCCGACAGCCACAGCGTGCGCGGCAAGAAGGTCACGTCATCGGCGTCG
GTCGAGCATACGGTCGAAGGGACCGTGTTGAAGCTGAATCCGTAA

Protein sequence :
MSRVFTLDSPHGDGLKFHTLDGSDELGRLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQGQSTRYLNGIVARASLAGRR
AERYYGYELLVRPWLWLATRRSDCRIFQNKTVPEIVQEVLSTYGFPIENHLAESYVPREYCVQYNGTDAAFVSRLMEFEG
IYYWFRHAEDTHTLMLSDAMSSHTALPGYETIPYIARDRTVIADVEHIDGWLPARQVSVGKHQTTDYDYTKPRADLSSQK
VDPRGHDHDSFASFEWPGGYRDDAPGAHYSRVRLEEQQAEHERASADTDVRGAAPGYLFTLAHCPRADRNREYLIVRCQY
RFQENAYASDQGTEAVVHQTMMLVRPSSLPYRSPRETPRPRTNGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ
DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVYNGERMPPWGLPGSATQSGLLSRSSPGGTTEHA
NAFRFEDKKGAEQLWMHAERNFDAETEADHSLSIEHDHTHTVGNDETMQVRNNRQRSVGQDETVNIGRHRVAQIKGNETQ
GVVGDRTRTVGKKETVTIVSDREATIGGNHMETVVKDKTESIGEGKTLNVVKHYQTNSKSMKTTVAEHHVEEIGERTSTI
AHAHTLTVRGEHAVSVGANHTTNVQHQVLVNAGDQRALVCGKSSVLMKSDGTILIQGVNVESSGSDSHSVRGKKVTSSAS
VEHTVEGTVLKLNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0319 NP_454896.1 Rhs-family protein Not tested SPI-6 Protein 1e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2773 YP_006659620.1 Rhs element Vgr protein VFG2077 Protein 8e-126 43