Gene Information

Name : BPC006_II2792 (BPC006_II2792)
Accession : YP_006659639.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2824606 - 2827272 bp
Length : 2667 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGATATCGGCCGAGTGACCTTGTTTGGAAAACTGAACACTTTTCTCTACGAGACCCTGGAGCAGGCGACCGGCTT
TTGCCGGCTGCGCGGCAATCCCTATGTCGAGCTCGCGCACTGGCTGAACCAGATGCTCCGGCGCCCGGACAGCGACGTGC
ACCGGATCCTGCGCCGCTTCGACATCGACGCGGCGGCGATCGACCGCGGGATCGTTTCGGCGCTCGACCGGCTGCCGCGC
GGCGCGGGTTCCGTGTCCGATCTGTCCGCGCACATCGATGATGCGGTCGAACGCGCATGGGTGTACGCGACGCTCAAGTA
CGACGCGGCGCAGATTCGCGGCGCGGTGCTGCTGCTCGCGCTCGTGAAGACGCCGCAGCTGCGCAACGTGCTGTACGCGA
TCGCGCGGGACTTCGAGCGCATCGTGCCTGACGTGCTTGCCGACGAGCTCGAACGGATCGTCGCAGGCTCGCCGGAGGCG
CCGTCGCCCGCCGCGCGCGCGGCGGCGGGGGCGATCGGCGACGCGGGGGCGGCGCCGTCCGCCGCGCGCGAAGGCTCGGC
GCTCGCGCGCTACGCGATCGATCTGACCGCGCGTGCGCGCGCGGGCGAGATCGATCCGGTGGTCGGCCGCGACGGCGAGA
TTCGGCAGATCGTCGACATCCTGCTGCGCCGCCGGCAGAACAATCCGCTGCTCGTCGGCGAGGCGGGCGTCGGCAAGACC
GCGGTCGCCGAAGGCTTCGCGCTGCGCATCGTCGCGGGCGACGTGCCGCCGCCGCTGCGCGACGTCGAACTGTATCTGCT
CGACATCGGCCTGCTGCAGGCGGGCGCGAGCGTGAAGGGCGAATTCGAGAGCCGCCTGCGCGGCGTGATCGACGAGGCGA
GTTCGAGCGAGCGGCCCGTCATTCTGTTCATCGACGAGGTACACACGCTCGTCGGCGCGGGCGGCGCGGCGGGCACGGGC
GACGCGGCGAACCTGTTGAAGCCCGCGCTCGCGCGCGGCCTGCTGCGCACGATCGGCGCGACGACGTGGTCCGAATACAA
GCAATACATCGAGAAGGACCCGGCGCTCACGCGGCGCTTCCAGCTCGTGCAGGTGCGCGAGCCGGAGGAGGGCGCGGCGC
TGGCGATGCTGCGCGGGCTCGCCGCGAAGCTGGAGGCGCACCATCGCGTGCTCGTGCTCGACGATGCGCTGCAGGCGGCC
GTCACGCTGTCGCATCGCTACATTCCCGCGCGGCAGTTGCCGGACAAGGCGATCAGCCTGCTCGACACCGCGTGCGCGCG
CGTCGCGGTCAGCCAACACGCGGTGCCCGCGCCGATCGAGGACGTGCGGCGGCGGATCGATAGCCTGCGCGTCGAGCGCG
AGCTGATCGCGCGCGAGTGCGCGCTCGGCGCGGGCGATGCGCAACGGCTCGATGCAATCGATGCATCGATCGCCGGCGAA
CAGACCACGCTCGATGCGCTCGACGCGCGCTGGCAGGCGGAGCGCGACGCGCTCGGCAAGATCGTCGACTGGCGGGCCTC
GCTGCTGGCCGACGATTCTTCGCGCGTGCTCGATGAGGCGGCGCGCGCGGACGTGCAGGCGAAGCTCTCGGCCGCGCTGC
GCGCGCTCGCCGAATTGCAGGGCGAGACGCCGCTCGTGCTGCCCGCGGTCGATACGCACGCGGTGGCCGCCGTGGTGTCC
GACTGGACCGGCATCCCGCTCGGGCGGATGGTGCGCGACGAGATGCAATCGGTGCTGAAGCTCGCCGAGACGCTCGCCGA
GCGCGTGGTCGGCCAGCCGCACGCGGTCGGGCTGATCGCCGAGCGCATTCAGACCGCGCGCGCGCGGCTCGACGATCCGG
CCAAGCCGCACGGCGTGTTCCTGCTGTGCGGGCCGTCCGGCGTCGGCAAGACCGAGACGGCGCTCGCGCTCGCCGAGACG
CTGTACGGCGGCGAGCACAACGCGATCACGATCAACATGAGCGAGTTTCAGGAGGCGCACACCGTATCGACGCTCAAGGG
CGCGCCGCCCGGCTACGTCGGCTACGGACAGGGCGGGGTGCTGACCGAGGCGGTGCGGCGGCGGCCGTACAGTGTCGTGC
TGCTCGACGAAATCGAGAAGGCGCACCGCGACGTGCACGAGATCTTCTTTCAGGTGTTCGACAAGGGCTGGATGGAAGAC
GGCGAGGGGCGCTATATCGACTTTCGCAACACGGTGATCCTCCTCACGTCGAACGTCGGTTCCGAGCGCGTGATGCAGCT
GTGCCGCGATCCGCAGCGCCTGCCCGATGCGCAGACCTTGACCGATGCGCTGCGCGCGCCGCTGCGCGAGGTGTTTCCCG
CCGCGTTGTTGGGACGCCTGACGGTCGTTCCGTACTACCCGCTCACCGACGAGATGCTCGCGCGGATCGTCGCATTGCAG
CTCGCGCGCATCGAGCGGCGCATCGAAGCGCACCACGGCATCGCGTTGCGCTGCGCGGATTCGGCGACCGCGCTGATCGC
CGAGCGCTGCCGGACGATCGAATCCGGCGGCCGCATGGTCGACGCGATTCTCACGCACACGGTGCTGCCGCGCATCAGCC
AGGAGATCCTGCGCGCGACGATCGAGGGGCGCGCGCTGCGGGCGATCGACGTGAGCGCCGAAGACGGCCAGTTCGTTTAC
CGATTCGAAGAGGAGGGCGCGACGTGA

Protein sequence :
MSDIGRVTLFGKLNTFLYETLEQATGFCRLRGNPYVELAHWLNQMLRRPDSDVHRILRRFDIDAAAIDRGIVSALDRLPR
GAGSVSDLSAHIDDAVERAWVYATLKYDAAQIRGAVLLLALVKTPQLRNVLYAIARDFERIVPDVLADELERIVAGSPEA
PSPAARAAAGAIGDAGAAPSAAREGSALARYAIDLTARARAGEIDPVVGRDGEIRQIVDILLRRRQNNPLLVGEAGVGKT
AVAEGFALRIVAGDVPPPLRDVELYLLDIGLLQAGASVKGEFESRLRGVIDEASSSERPVILFIDEVHTLVGAGGAAGTG
DAANLLKPALARGLLRTIGATTWSEYKQYIEKDPALTRRFQLVQVREPEEGAALAMLRGLAAKLEAHHRVLVLDDALQAA
VTLSHRYIPARQLPDKAISLLDTACARVAVSQHAVPAPIEDVRRRIDSLRVERELIARECALGAGDAQRLDAIDASIAGE
QTTLDALDARWQAERDALGKIVDWRASLLADDSSRVLDEAARADVQAKLSAALRALAELQGETPLVLPAVDTHAVAAVVS
DWTGIPLGRMVRDEMQSVLKLAETLAERVVGQPHAVGLIAERIQTARARLDDPAKPHGVFLLCGPSGVGKTETALALAET
LYGGEHNAITINMSEFQEAHTVSTLKGAPPGYVGYGQGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEIFFQVFDKGWMED
GEGRYIDFRNTVILLTSNVGSERVMQLCRDPQRLPDAQTLTDALRAPLREVFPAALLGRLTVVPYYPLTDEMLARIVALQ
LARIERRIEAHHGIALRCADSATALIAERCRTIESGGRMVDAILTHTVLPRISQEILRATIEGRALRAIDVSAEDGQFVY
RFEEEGAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 54
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-122 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-122 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2792 YP_006659639.1 ATP-dependent Clp protease, ATP-binding subunit ClpB VFG2076 Protein 0.0 59
BPC006_II2792 YP_006659639.1 ATP-dependent Clp protease, ATP-binding subunit ClpB VFG2084 Protein 7e-141 43