Gene Information

Name : appF1 (ARUE_c07770)
Accession : YP_006660747.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Resistance
Product : oligopeptide transport ATP-binding proteinAppF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 817575 - 818390 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCAGTCAACACAGCAAGGCTCCAAGCCGGTCATCGAACTCAAGGACGTCAAGGTCTATCACCATGCACGGACCGG
CGGCTTGTTCCGGCCGAACATCGTCAAAGCCGTGGACGGCGTGGACTTCACCATCAGCCGCGGCGAAACCGTGGGCATCG
TCGGTGAGTCCGGCTGCGGCAAGTCCACACTCGCGTCAGTGCTCGTGGGACTCCAGCCGCCGACGTCGGGCAAGGTCTTG
TTCCACGGAAAGCCCGCCATCAAGCGGAACGCTGCCATGCGCAAGCAGTTTGGTCGCTCCGTCTCCGTGGTCTTCCAGGA
TCCGGCAACCGCACTGAACCCGCGCATGACCATCCAGGACATCCTCACGGATCCGCTGCAGATCCACGGCATCGGCAACG
CGGCCTCCCGAGCCGCCAAGGTCAAGGAACTGTTGGCGCTGGTCGGCTTGCCGCAATCGGCAGCCGAAGTGACGCCGTCG
CAGGTTTCCGGCGGGCAGCGCCAGCGCGTGGCCATCGCCCGTGCACTGGCTCTGGACCCGGACATCATCGTGGCGGACGA
GCCGACGTCGGCCTTGGACGTTTCCGTCCGGGCGCAGGTCCTGAACCTGCTGTCCGATCTAAAGACCCAGCTGAACCTGG
GCATGGTGTTCATCTCGCACGACATCCAGACCGTCCGCTACGTTTCGGATCGGATCTGCGTCATGTACTTCGGCAAGATC
GTTGAGCAAGGCTCAGCCGCGCAAGTCTTCGACAACCCGAGCAACGACTACACCAAGAAGCTCCTGGGCGCCGCGCCGAG
CCTGCTTCACATCTAG

Protein sequence :
MSQSTQQGSKPVIELKDVKVYHHARTGGLFRPNIVKAVDGVDFTISRGETVGIVGESGCGKSTLASVLVGLQPPTSGKVL
FHGKPAIKRNAAMRKQFGRSVSVVFQDPATALNPRMTIQDILTDPLQIHGIGNAASRAAKVKELLALVGLPQSAAEVTPS
QVSGGQRQRVAIARALALDPDIIVADEPTSALDVSVRAQVLNLLSDLKTQLNLGMVFISHDIQTVRYVSDRICVMYFGKI
VEQGSAAQVFDNPSNDYTKKLLGAAPSLLHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
appF1 YP_006660747.1 oligopeptide transport ATP-binding proteinAppF BAC0274 Protein 5e-35 43