Gene Information

Name : LMOSLCC2540_0416 (LMOSLCC2540_0416)
Accession : YP_006677959.1
Strain : Listeria monocytogenes SLCC2540
Genome accession: NC_018586
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 433759 - 434433 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
TTGATACAACTATTTAATATTTCCAAATCCTATCAAATGGGTGAATGCACCATAAAGGCTCTAGATAATGTATCATTGCA
AATTGATCAAGGGGAATTTCTGGCCATTATCGGACCGTCTGGCTCTGGAAAATCTACTTTAATGAACATCCTCGGTATAC
TTGACAGAGCAACGATAGGAGAATACTACCTCAATAAAACGAATTTAATGCGAATATCAGATAAGAAAATTTCTCGAATA
AGGAATAAGAAAATTGGTTTTATTTTTCAACAATTTAATTTAATGCCACGACTTACTGCTTTTGAAAATGTAGAATTGCC
ATTAGTATATCGAGGTGTGGGCAAAGCTACTCGAAAAAAAGTAGTATTAAAAAGTTTAGAACGTGTCGGACTATTAGATA
AAGAAAAACATATACCAGCCCAGCTTTCAGGAGGACAGCAGCAACGGATTGCAATAGCTCGAGCCATCGCTGGAAGTCCA
GAATTAATATTAGCAGATGAACCTACTGGCGCGCTAGACTCTAAAACTGGAGAAGAAGTAATGACTTTGCTAAGAGAAAT
TCATAGAGAAGGAAATACATTAATCATGATTACCCACGACAAAGAAATTGCAAATCAAGCAGAACGAATAATAGAAATAA
AAGACGGAAAACTCCGTGAATGGAACAAATTATGA

Protein sequence : 
MIQLFNISKSYQMGECTIKALDNVSLQIDQGEFLAIIGPSGSGKSTLMNILGILDRATIGEYYLNKTNLMRISDKKISRI
RNKKIGFIFQQFNLMPRLTAFENVELPLVYRGVGKATRKKVVLKSLERVGLLDKEKHIPAQLSGGQQQRIAIARAIAGSP
ELILADEPTGALDSKTGEEVMTLLREIHREGNTLIMITHDKEIANQAERIIEIKDGKLREWNKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-50 52
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-24 47
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-39 47
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-32 46
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 45
LMOSLCC2540_0416 YP_006677959.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-26 42