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Name : lysS (WESB_1417) Accession : YP_006703973.1 Strain : Brachyspira pilosicoli WesB Genome accession: NC_018604 Putative virulence/resistance : Virulence Product : lysyl-tRNA-synthetase LysU class II Function : - COG functional category : - COG ID : - EC number : - Position : 1559873 - 1561405 bp Length : 1533 bp Strand : + Note : - DNA sequence : ATGTCAGAAAATCAAAATAATTCTGAAAATACACAAAATGAAAAAAATAGCAGTGTAGAAAAAAATGTAGAAAAAGAAAA CAGAAAAGAGAAATTAAACACATTAAGAAATTTGGGAATTAATCCATTTCCAAATAGTTATGATGTAACTTATAAATCAA AGGATATAGCAGAGCAATTTGAAGAGCTTGAAAAGAATGAGACAGAAGTTGCTGTTGCTGGAAGAATTATGCTTTATAGA GTAATGGGAAAATCTTCATTTTTAACTATAAAAGATTCTAAAGGTACTATTCAAGCATACATACAAAAAGATAAACTTGG CGATGAGTTTTATAATACAGTATTTAAAAAACTTATAGATATAGGTGATATTGTTGGTGTAAAAGGAACTGTATTTAAAA CAAAAACAGGCGAGATTACAATATATGCAAGCGAATTAAAGCTTCTTACAAAATCATTAAATCCATTACCTGAAAAGTTT CATGGATTAACTGATACAGAGCTTCGCTACAGACAAAGATATGTTGATTTAATAATGAATGATGATGTTAAAGAGGCTTT TATTAAACGCTCTAAAATGATATCTGCTATAAGAGAAATAATGATAGAAAATAATTTTCTAGAAGTAGAGACTCCTATGA TGCATCCATTAATTGGAGGAGCTAAGGCAAAACCATTTGTTACGCATCATAATACTTTAGATATGACACTTTATTTAAGA ATAGCACCTGAACTTTATTTGAAAAGACTTATAGTTGGCGGTTTTGATAAAGTATTTGAGCTTAATAGAAATTTCCGTAA TGAAGGTATATCTACAAGACATAATCCAGAGTTTACTATGATGGAAGCATATATGGCTTATGCTAATTTCCACAAGGTTA TGGAATTGGTAGAAGAGGTGTTCTCTAAAGTATGTTTCAAATTAAATGGAAAATATACTTCTCAGTATAAAGATTATGAG ATTAATTTTAAGCCTCCATTTGCAAGAGTGCCTATGGTTGATTTAGTTAAAGAGCATTCTGGACTTGACTTTAATTCTAT ACAATCAGATGATGAAGCTATATCAAAAGCAAAATCAATAGGGGTAGAGATAGATACCTCAAAAAACAAACCTACTAAAT GGGAAGTGATGGTTGCTGTATTTGAAGAGAAAGTTGAAGAGAAACTTATTCAGCCTACATTTGTTATTAATTATCCTAAG GCAGTTTCACCTCTTTCTAAATCTTATCCTGATAATCCAGACATTACAGAAAGATACGAACTCTTTATTGGTGGAATGGA GATGTCTAATGGTTTTAGTGAGCTTAATGACCCAATAGACCAAAAAGAGCGTTTTGAGGAACAGTTAAAAGCAAAAGCTC GCGGTGAAGATGAGACTATGGATATGGATTTAGATTTTATCAATGCATTAGAATATGGTCTTCCTCCTACTGGTGGGCTT GGAATAGGAATAGATAGAATGGCTATACTTTTCTTAAATGTGCCTAGTATTAGAGATACTATTCTTTTCCCGCAGATGAG AAAAATAGAATAG Protein sequence : MSENQNNSENTQNEKNSSVEKNVEKENRKEKLNTLRNLGINPFPNSYDVTYKSKDIAEQFEELEKNETEVAVAGRIMLYR VMGKSSFLTIKDSKGTIQAYIQKDKLGDEFYNTVFKKLIDIGDIVGVKGTVFKTKTGEITIYASELKLLTKSLNPLPEKF HGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETPMMHPLIGGAKAKPFVTHHNTLDMTLYLR IAPELYLKRLIVGGFDKVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYE INFKPPFARVPMVDLVKEHSGLDFNSIQSDDEAISKAKSIGVEIDTSKNKPTKWEVMVAVFEEKVEEKLIQPTFVINYPK AVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQLKAKARGEDETMDMDLDFINALEYGLPPTGGL GIGIDRMAILFLNVPSIRDTILFPQMRKIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-109 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006703973.1 | lysyl-tRNA-synthetase LysU class II | VFG1668 | Protein | 7e-110 | 51 |
