Gene Information

Name : rrs (PAQ_117)
Accession : -
Strain : Candidatus Portiera aleyrodidarum BT-QVLC
Genome accession: NC_018618
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 125486 - 127017 bp
Length : 1532 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTAGCGGCAGACATAACACATGCAAGTCGAGCGGCATCATACAGGTTGGCAA
GCGGCGCACGGGTGAGTAATACATGTAAATATACCTTAAAGTGGGGAATAACGTACGGAAACGTACGCTAATACCGCATA
ATTATTACGAGATAAAGCAGGGGCTTGATAAAAAAATCAACCTTGCGCTTTTAGAAAATTACATGCCGGATTAGCTAGTT
GGTAGAGTAAAAGCCTACCAAGGTAACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGAAAAGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGTCATGCCGCGTGTGTGAAG
AAGGCCTTTGGGTTGTAAAGCACTTTCAGCGAAGAAGAAAAGTTAGAAAATAAAAAGTTATAACTATGACGGTACTCGCA
GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGAGGGTGCAAGCGTTAATCAGAATTACTGGGCGTAA
AGGGCATGTAGGTGGTTTGTTAAGCTTTATGTGAAAGCCCTATGCTTAACATAGGAACGGAATAAAGAACTGACAAACTA
GAGTGCAGAAGAGGAAGGTAGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAATACCAGTTGCGAAGGCG
ACCTTCTGGGCTGACACTGACACTGAGATGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGT
AAACGATATCAACTAGCCGTTGGATTCTTAAAGAATTTTGTGGCGTAGCTAACGCGATAAGTTGATCGCCTGGGGAGTAC
GGTCGCAAGGCTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCG
CAAAACCTTACCTACTCTTGACATCCAAAGTACTTTCCAGAGATGGAAGGGTGCCTTAGGGAACTTTGAGACAGGTGCTG
CATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAACG
CAGAAGGCGGGAACTTTAAGGAGACTGCTGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTA
AGAGTAGGGCAACACACGTGCTACAATGGCAAAAACAAAGGGTCGCAAAATGGTAACATGAAGCTAATCCCAAAAAAATT
GTCTAAGTTCGGATTGGAGTCTGAAACTCGACTCCATAAAGTCGGAATCGCTAGTAATCGTGAATCAGAATGTCACGGTG
AATACGTTCTCGGGCCTTGTACACACCGCCCGTCACACCATGGAAGTGAAATGCACCAGAAGTGGCAAGTTTAACCAAAA
AACAGGAGAACAGTCACTACGGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCTGTAGGGGAACCTGTGGCTG
GATCACCTCCTT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-136 85.7
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-136 85.7
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-234 84
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-234 84
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-234 84
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-234 84