Gene Information

Name : HIMB5_00001250 (HIMB5_00001250)
Accession : YP_006756075.1
Strain : alpha proteobacterium HIMB5 HIMB5
Genome accession: NC_018643
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 119880 - 120308 bp
Length : 429 bp
Strand : -
Note : PFAM: RNase H

DNA sequence :
ATGATTAAAATATATACAGATGGTTCTTGTTTAAATAATCCAGGCAATGGTGGTTGGGCAGCAATAATAATTAAAAACGA
TGAGATAACTGAAATTAGTGGTAATGAAAAAAATACCACAAATAATAGAATGGAATTACTTGCTCCAATTTCTGCATTAA
ATAAAATTAAAGATGAGTTAGATATTGAGATTTACACAGACTCTAAATATGTGAAACAAGGTATTACCGAATGGATTAAT
AATTGGAAAACTAATGATTGGAAAACATCAAAAAAAGAAGATGTTAAAAATAAAGATTTATGGACACAATTAGATATTCT
AAATAATTCTCTCAATATCCAATGGAAATGGGTAAAAGCCCATGCTGGTGATGAATTTAATGAAAAAGTCGATTTATTAG
CTAAAAAAGCTGCAGAAAAACTAGACTAA

Protein sequence :
MIKIYTDGSCLNNPGNGGWAAIIIKNDEITEISGNEKNTTNNRMELLAPISALNKIKDELDIEIYTDSKYVKQGITEWIN
NWKTNDWKTSKKEDVKNKDLWTQLDILNNSLNIQWKWVKAHAGDEFNEKVDLLAKKAAEKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-24 45