Gene Information

Name : O3M_21910 (O3M_21910)
Accession : YP_006772001.1
Strain : Escherichia coli 2009EL-2050
Genome accession: NC_018650
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4526448 - 4526969 bp
Length : 522 bp
Strand : +
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGTCTGACCGCGCCACTACCACAGCTTCCTTAACGTTCGAGTCGCTTTATGGCACACATCACGGCTGGTTGAAAAGCTG
GCTGACGCGCAAACTCCAGTCTGCTTTTGATGCAGATGACATTGCCCAGGACACTTTTTTGCGGGTAATGGTCAGCGAAA
CGCTCTCGACGATCCGCGATCCTCGCTCCTTCCTCTGCACTATCGCCAAACGCGTGATGGTGGACCTGTTTCGCCGAAAC
GCGCTGGAAAAAGCGTATCTGGAGATGCTGGCGCTTATGCCGGAGGGGGGAGCGCCTTCACCTGAGGAACGCGAAAGCCA
ACTCGAGACCCTACAACTCCTCGACAGCATGCTGGACGGGCTAAACGGCAAAACACGTGAAGCGTTTCTGCTTTCGCAAC
TGGATGGTCTGACATACAGCGAGATTGCGCACAAACTCGGTGTTTCCATCAGCTCCGTGAAAAAATACGTGGCGAAAGCC
GTCGAGCACTGCCTGCTGTTCCGTCTGGAGTATGGGTTATGA

Protein sequence :

MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRN
ALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA
VEHCLLFRLEYGL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	5e-77	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
O3M_21910	YP_006772001.1	RNA polymerase sigma factor FecI	VFG1049	Protein	2e-77	100