Gene Information

Name : C548_294 (C548_294)
Accession : -
Strain : Candidatus Portiera aleyrodidarum BT-QVLC
Genome accession: NC_018676
Putative virulence/resistance : Unknown
Product : small subunit ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 119091 - 120566 bp
Length : 1476 bp
Strand : +
Note : ssuRNA 3B SSU ribosomal RNA

DNA sequence : 
ATTGAACGCTAGCGGCAGACATAACACATGCAAGTCGAGCGGCATCATACAGGTTGGCAAGCGGCGCACGGGTGAGTAAT
ACATGTAAATATACCTTAAAGTGGGGAATAACGTACGGAAACGTACGCTAATACCGCATAATTATTACGAGATAAAGCAG
GGGCTTGATAAAAAAATCAACCTTGCGCTTTTAGAAAATTACATGCCGGATTAGCTAGTTGGTAGAGTAAAAGCCTACCA
AGGTAACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGAAAAGGCCCAGACTCCTACGGGAGGCA
GCAGTGGGGAATATTGGACAATGGGGGGAACCCTGATCCAGTCATGCCGCGTGTGTGAAGAAGGCCTTTGGGTTGTAAAG
CACTTTCAGCGAAGAAGAAAAGTTAGAAAATAAAAAGTTATAACTATGACGGTACTCGCAGAAGAAGCACCGGCTAACTC
CGTGCCAGCAGCCGCGGTAAGACGGAGGGTGCAAGCGTTAATCAGAATTACTGGGCGTAAAGGGCATGTAGGTGGTTTGT
TAAGCTTTATGTGAAAGCCCTATGCTTAACATAGGAACGGAATAAAGAACTGACAAACTAGAGTGCAGAAGAGGAAGGTA
GAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAATACCAGTTGCGAAGGCGACCTTCTGGGCTGACACTGA
CACTGAGATGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATATCAACTAGCCGT
TGGATTCTTAAAGAATTTTGTGGCGTAGCTAACGCGATAAGTTGATCGCCTGGGGAGTACGGTCGCAAGGCTAAAACTCA
AATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGCAAAACCTTACCTACTCTTG
ACATCCAAAGTACTTTCCAGAGATGGAAGGGTGCCTTAGGGAACTTTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGT
GTTGTGAAATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTTGCCAACGCATAAGGCGGGAACTTTAAG
GAGACTGCTGGTGATAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCCTTAAGAGTAGGGCAACACACGTG
CTACAATGGCAAAAACAAAGGGTCGCAAAATGGTAACATGAAGCTAATCCCAAAAAAATTGTCTAAGTTCGGATTGGAGT
CTGAAACTCGACTCCATAAAGTCGGAATCGCTAGTAATCGTGAATCAGAATGTCACGGTGAATACGTTCTCGGGCCTTGT
ACACACCGCCCGTCACACCATGGAAGTGAAATGCACCAGAAGTGGCAAGTTTAACCAAAAAACAGGAGAACAGTCACTAC
GGTGTGGTTCATGACTGGGGTGAAGTCGTAACAAGG

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-136 86.4
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-136 86.4
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-234 84.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-234 84.6
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-234 84.6
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-234 84.6