|
Name : secD (AMEC673_13255) Accession : YP_006799714.1 Strain : Alteromonas macleodii English Channel 673 Genome accession: NC_018678 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3090651 - 3092495 bp Length : 1845 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGCTAAACAAAAACTCTATTTGGAAAGTACTGAGTGCACTCATTGTGGTTGCAATGTGTGCACTTTATGCGCTTCCTAA CATTTACGGTGAAGATCACGCCGTACAAATCTCAGCAGGCCGTGACGCTGTGGTAACTGACGCCACTGTGGAACAAGTAA AAGCCGCGCTAAGTGAAAAGAATATCTCTCCAAAACGTGTTGAGTTTGAGAACGAACAAATATTAGTTCGCGTTTCGGAT TCTGACACCCAGCTTGTAACGCGCGAAACGCTTGAAAAGGCGCTTGGTGATGACTACTACGTGGCTATGAACCTTGCCCC TGACACGCCAGAATGGCTTGAAGACCTAGGTGGCGCGCCAATGAAGCTAGGTCTTGACCTTCGCGGTGGTGTTCACTTCT TGATGGAAGTGGATATGACCGAAGTGATTGCTAAGTCGCTAGAAGACGCAGAGGGTGGTTTCCGTACTTCGCTGCGTGAA GAGGGCATTCGTTATCGCGGTGTAAAACAGGTTGACGATCATATCGACATTACGTTCCGTGATGAAGATGCGCTAGACAA GGCAGAGTTCTTTTTGCGCAACCAAAGTCGCGACCTAACCTTTAACCAGGTGGACGACTTAACACTTCGCGCTATTTTTG CTGAAAGCAAGCTTCAGGAAATTCGCGACAACGCGGTTAAGCAAAACATTACCATTATTCGTAATCGTGTAAACCAACTT GGTGTGGCTGAGCCGCTTGTACAAAAGCAAGGTGCTGATCGCATCGTTGTGCAGCTTCCAGGTATTCAAGACACCGCCCG TGCGAAAGAGATTCTTAATGCCACAGCAACACTAGAATTTCGCATGGTAGATCAGAAGAACGATATCCGTGATGCATTGA ACGGCCGCGTTCCTCCTGGCTCTCAAGTGATTGAAGATCAGCAAGGCATTCCTCAGCTTCTTGAAAAGCGTATTATGCTA ACCGGTAGCCATATTATTGATGCGAATAGCGGTGTTGATGAGTACGGACTTCCGAACGTAAACATCTCGCTTGATTCTGA AGGCGGTAATAAGATGTCTCGCTCAACTCGTGGGAACATTGGTAAACCAATGGCTACGGTGTTTATCGAATACAAGTCAA CTGGCGAACGTAACAAAGACGGCAAGCTAGTGTTTGAAAAACACGAGCAAGTTATCTCGGTTGCGACTATTCGTGCGCAG CTGGGTAGCAAGTTCCAAATCACAGGTCTTGATTCACCGAAAGAAGCCCGTGACTTAGCGTTACTACTTCGCGCAGGTGC ACTGATTGCGCCAATTCAAATTGTTGAAGAGCGTACGGTTGGACCAAGCTTGGGTAAAGAAAACATTGAGCTGGGCATGC AGGCTATTATGTATGGTCTGGCAGCGGTACTTGTTTTCATGTTGATTTACTACAAAGCGTTTGGTGTGGTAGCGAACATC GCTCTGATTACAAACCTAGTTATGATTGTGGGCATTATGTCGATGATCCCTGGTGCAACGCTTACGCTACCGGGTATGGC AGGTATTGTACTGACCGTTGGTATGGCGGTAGATGCAAACGTGCTTATCTTTGAGCGTATACGAGAAGAGATACGTGATG GCCGCAGCCCACAGCATGCCATTCATCAGGGTTACGACAGTGCTTTTTCTACCATTCTAGATGCTAACATTACCACCTTC ATTGCAGGCTTAATCCTGTTTGCCGTGGGCACAGGCCCAATTAAAGGCTTCTCGATTACACTGATGATTGGTATAGCAAC CTCGATGTTTACCGCAATCCTTGTTACGCGCGTTATTGTTAACGCAGTATGGGGCGGTCGACGCGTAGAGAAATTGGCGA TTTAA Protein sequence : MLNKNSIWKVLSALIVVAMCALYALPNIYGEDHAVQISAGRDAVVTDATVEQVKAALSEKNISPKRVEFENEQILVRVSD SDTQLVTRETLEKALGDDYYVAMNLAPDTPEWLEDLGGAPMKLGLDLRGGVHFLMEVDMTEVIAKSLEDAEGGFRTSLRE EGIRYRGVKQVDDHIDITFRDEDALDKAEFFLRNQSRDLTFNQVDDLTLRAIFAESKLQEIRDNAVKQNITIIRNRVNQL GVAEPLVQKQGADRIVVQLPGIQDTARAKEILNATATLEFRMVDQKNDIRDALNGRVPPGSQVIEDQQGIPQLLEKRIML TGSHIIDANSGVDEYGLPNVNISLDSEGGNKMSRSTRGNIGKPMATVFIEYKSTGERNKDGKLVFEKHEQVISVATIRAQ LGSKFQITGLDSPKEARDLALLLRAGALIAPIQIVEERTVGPSLGKENIELGMQAIMYGLAAVLVFMLIYYKAFGVVANI ALITNLVMIVGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIFERIREEIRDGRSPQHAIHQGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAILVTRVIVNAVWGGRRVEKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-124 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-124 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-124 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-124 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-124 | 47 |
