Gene Information

Name : AMEC673_13365 (AMEC673_13365)
Accession : YP_006799736.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 3115271 - 3117466 bp
Length : 2196 bp
Strand : +
Note : COG2225 Malate synthase

DNA sequence :
ATGCAAGGATATATTACTAGAGGCCGACTACAGGTTGCCGAACAACTCGATAACTTTATTAATGAACAGGCACTTCCTGG
CACAGGCGTAGATAAAGACACCTTTTGGCAAGGTGCAGAAACCCTCTTCGAAAAATTCATTCCTCAAAATCGCGCACTAT
TAGAAAAGCGAGAACAGCTTCAGCGCGCTATCGACGATTATCATAAAGCTGGTAACCCGGTAAACGGAAACGAATATACC
GACTTCCTAAAAAGCATTGGTTACCTTGTTGAGCAGCCGTCACAAGTAAGTGCACAAACACAAAATGTAGACGCCGAAAT
AGCAACAATGGCAGGCCCTCAGCTAGTCGTGCCAATCAACAACGCTCGCTATGCACTTAACGCGGTAAATGCCCGTTGGG
GTAGCCTTTACGACGCACTATACGGCACTGATGTCATCAGCAATGAAGGTGGAGCAGAAGCGGGAAAAAGCTACAACCCC
GTACGCGGCGCCAAAGTAGTTGCGAAAGCGAAAGACTATCTAGATAGCATGATACCCCTTGCGAAAGGCAGCCACGCTGA
CGTTACTGAGTATAAGATTGAATCGGGTAAATTGGCGATCACTCTTGCCGACGGCGATGAAACCACCTTAGCAAACACAG
AGCAATGGCAAGGATACCAAGGTGACATTAGCGCACCGTCAAGCCTGCTATTTGCACACAACGGTCTGCATTTTGAAATT
CAACTAGACCCGACTCACCCTATTGGCGAGAGCGATGCCGCAAACGTAAAAGACGTACTGGTTGAAGCTGCATTAACCAC
CATTATGGACTGCGAAGATTCCGTTGCTGCTGTTGACGCTGAAGACAAAACCTTGGTGTATAGCAACTGGTTAGGCTTAA
TGAAAGGCTCGCTAAGCATTGAAATGACAAAGGGCGGCAAGCAGCTTGTTCGCGCTATGCATGACGATAGAAGCTACCAG
CCGTCTAAACACGCTTCACAAGACAAGCTAAAAGACGGCGAACTAGTACTTTCTGGTCGAAGCCTTATGTTTGTTAGAAA
CGTGGGCCACCTTATGACTAACAATGCCATGCTCTTTGACGGCGAAGAAGTGCCAGAGGGGATCATGGACGGTTTAGTCA
CTTCACTTATCGCAAAGCATGATCTTTTAGGAAACAGCAAATTTAAAAACAGCCGCGAAGGCAGTATTTATATTGTTAAA
CCTAAAATGCACGGGCCAGAAGAAGTTGCATTCTCTAACGCATTGTTTGGTGCTATCGAAGCCATTATCGATGTTCCAGC
TAACACCCTTAAAATGGGCATAATGGATGAAGAACGCCGCACAAGTATCAATTTACAAGCATGTATTGCCGAGGCTACTT
CACGCGTTGTGTTCATTAACACGGGTTTCTTAGACAGAACCGGTGATGAAATTCATACCTCAATGCTTGCCGGCCCTTTT
GCAGAAAAAGCCGCGCTCAAGTCTATGGCGTGGATTAAGGCTTATGAAACTGCAAACGTCGCAGTAGGCCTTCGCTGCGG
CCTTTCTGGCAAAGCGCAAATTGGTAAGGGCATGTGGCCAATACCTGACGAAATGCAAAATATGATGACCGCCAAAATAG
GTCACCCTAAGGCCGGCGCTAATACTGCTTGGGTACCCTCACCTACTGCTGCAACACTGCACGCGCTTCATTATCACGAT
GTAAATGTGTTTGACGTTCAAAAGTCGCTAGATGAAAACTTTAGTGGCCTTGCTGACATACTTACCATTCCATTGTTAGA
AGATGCCTCTACTTTGACGCGTGAGAGTATTAAGCGTGAAATCGACAATAACGTTCAGGGCATTTTAGGCTACGTTGTAC
GCTGGGTTCACCAAGGCGTAGGCTGCTCGAAAGTTCCTGACATTAACAATGTAGGCTTGATGGAAGACCGCGCGACGTTG
CGAATTTCATCGCAGCATATCGCTAACTGGCTAGAGCACGGCATTGTAAGTGTAGATCAGGTAAAAGAGTCTTTGGCTCG
TATGGCTGTCTTAGTAGATGAGCAAAATGCGGGGGATCCTGAGTATATCCCTATGGCACCTGATTTAAACAGCTCAATTG
GTTTCTTAGCCGCAAGCGATCTAATATTCAAAGGTAAAGAGCAGCCTAGCGGTTACACAGAACCTTTACTGCACGCACGT
CGCCGCGAAATGAAGGCAAAACTTGCGGCGAGCTAG

Protein sequence :
MQGYITRGRLQVAEQLDNFINEQALPGTGVDKDTFWQGAETLFEKFIPQNRALLEKREQLQRAIDDYHKAGNPVNGNEYT
DFLKSIGYLVEQPSQVSAQTQNVDAEIATMAGPQLVVPINNARYALNAVNARWGSLYDALYGTDVISNEGGAEAGKSYNP
VRGAKVVAKAKDYLDSMIPLAKGSHADVTEYKIESGKLAITLADGDETTLANTEQWQGYQGDISAPSSLLFAHNGLHFEI
QLDPTHPIGESDAANVKDVLVEAALTTIMDCEDSVAAVDAEDKTLVYSNWLGLMKGSLSIEMTKGGKQLVRAMHDDRSYQ
PSKHASQDKLKDGELVLSGRSLMFVRNVGHLMTNNAMLFDGEEVPEGIMDGLVTSLIAKHDLLGNSKFKNSREGSIYIVK
PKMHGPEEVAFSNALFGAIEAIIDVPANTLKMGIMDEERRTSINLQACIAEATSRVVFINTGFLDRTGDEIHTSMLAGPF
AEKAALKSMAWIKAYETANVAVGLRCGLSGKAQIGKGMWPIPDEMQNMMTAKIGHPKAGANTAWVPSPTAATLHALHYHD
VNVFDVQKSLDENFSGLADILTIPLLEDASTLTRESIKREIDNNVQGILGYVVRWVHQGVGCSKVPDINNVGLMEDRATL
RISSQHIANWLEHGIVSVDQVKESLARMAVLVDEQNAGDPEYIPMAPDLNSSIGFLAASDLIFKGKEQPSGYTEPLLHAR
RREMKAKLAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 57