Gene Information

Name : AMEC673_17610 (AMEC673_17610)
Accession : YP_006800577.1
Strain : Alteromonas macleodii English Channel 673
Genome accession: NC_018678
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4138785 - 4141076 bp
Length : 2292 bp
Strand : -
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGCCTGTAAATGGTAAGCGCATTATTTTGTTAGGAACCCTGTTTCCCATGTTGTCAGCGGGTGTGCTGGCGCAAAGCGA
AGAGATAGAAACGCTCGACACCACCGTTGTGCAATCTGCGTCTGAAGAGCTGAAGCAAGCCCAAGGCGTGTCTATCATTA
CGGAAGAAGATTTCAAACGTCGTCCTGTCACTAACGATATCGCTGAAATTGTAAGAACCATGCCGGGTATCAACCTTACA
GGTAACTCAAGCTCAGGACAGTATGGCAACAAACGTCAAATCGACATTCGCGGAATGGGTCCAGAAAATACGCTTATTTT
AATTGACGGCAAGCCAGTGTTGTCGCGTAACTCTGTAAAAATGGGTCGTTCAGGCGAGCGAAACACACAGGGCGACAGCA
ACTGGGTTCCAGCTGAAGCGATTGAGAGCATTGAAGTTATTCGTGGTCCAGCAGCAGCTCGCTATGGCTCTGGCGCATCA
GGTGGTGTTATCAATATTATCACTAAGTCTCCTGATGAAGCTTCTACCTCTATCACCGCTCAGACCGAGCTTTCTTCAAA
TAAATACGAAGGCGACAACCGTCGTTTTAACCTAGTAACAAGTGCGCCTTTATCTGAGCGTTTCTCTCACCGCACTATTG
TTAACTACAACGAACAGGACGCTGACGACCCACGCGTAAATTTAGACGCAACAGACGTAACAACGGGCCGCGGCGGCACA
GCGAAAGCGGTAGGTGCAGGACGTGAAGGTGTTGAAAACATCGACGTGCGTACTCTTGTTCGCTTCGACCAAGATGATAT
TAATCGCTGGGACTTTGAAGCAGCCTATAGCCGCCAAGGCAACCGTTATGCCGGTGACAATGCATTTCAAGGCGTAAGCT
ACCCCGTTGACGAAAACGGCAACGTCATCATACCTGAACCTGAAGACCTGGCAGAAACTGATGCTCAGAGCCTAATTGGT
GAAGAAACACTAGTAATGCACCGTCGTACGTTCGGCGTAACACACAATGGTGAGTATGACTTCGGCGATTCATTTAGCTA
TATCCAATACGAAAGCACGTCTAACAGCCGTTTAGGTGAAGGCTCTGCAGGTGGTGGTGAAGGTCGCATTAATAGCCTTG
AGATGACCACCATCAAATTAGAGAACATTACCGCAAAGACCGAGTGGAACGTGCCTTTAACGTTAGGCGGCTTCAATCAA
ACCGCAACGTTTGGTGCGGAATACCGCAAAGAGACCCTAGACGATTCAGTTAGCAATCAGCTTTCTCTGAACGTGGTTGA
TGACGGTACTATTCCTGGCGTAGAGACTGACCCAGAAAATCGTCCATCTGAAACCGACGCCACGCTTGTAGGTGTGTATG
TTGAAGACAACATCATGCTAACAGATTCAATCACGCTTACGCCTGGGCTGCGTTTTGATGATCACAGCAAAGCGGATACA
AACCTTAGCCCGAGCTTGAATGCATCATGGCAGGCATCGCCTAATATTGTGGTTCAAGGTGGTATTAGCCGTGCTTTTAA
AGCACCAAATCTCTATCAATTAAACCCTAACTACGTGTACTACACACGAGGTAATGGTTGCCCAGTTGACTTCTCTAACC
TAGGTGGCGGGTGTCACATTCTAGGAAACCCTGACCTAGAGCATGAAACCTCAGTAAACAAAGAAATTGGTGTTAACTAC
ACCAACGAAGAGGGTTTGAACGCGGGTATTACTTACTTCCACAACGACTATAAAGACAAAATTGGCACCGGTAATGTACC
GCCAGAGTATGTGTTACCTGGCGAAGAAGGTGGCGAGGCAAACGTTCAGGTATTCCAGTGGTTTAACGTTCCTGAAGCGG
TTATTTCTGGCCTTGAAGGTAACTTGTTGTTCCCTGTAACCAGCACTATTGAGTGGTCGACCAACTTTACCGTGATGCTT
GAGTCAGAGGATAAATCTACTGGCCAGCCATTATCTATCGTTCCTGACTACACAGTGAACTCGCTAATAAGCTGGCAAGC
CACCGACGCACTTGAGCTTGTGCTTAGCGCTCAACACTACGGTGAGACAGAAAGCCCTACGGCCAGCGTTAATTCGGGCG
CCGTTATCGAAGCTGATGATCGCGAAGCATATACCATAACCAATATTAACGCCATTTACGCGTTCGACGAAAACTTAAGC
TTCAACGTGTCGGTTAAGAACTTGTTTAACGAAAGCGTTAAGCGTGAAGGTACACAAGCATCTAACGCAGGGGCGAATAC
TTTCAATGAACCAGAAAGAAGCTTCTTGTTGTCTGCTACTTACCAGTTCTAA

Protein sequence :
MPVNGKRIILLGTLFPMLSAGVLAQSEEIETLDTTVVQSASEELKQAQGVSIITEEDFKRRPVTNDIAEIVRTMPGINLT
GNSSSGQYGNKRQIDIRGMGPENTLILIDGKPVLSRNSVKMGRSGERNTQGDSNWVPAEAIESIEVIRGPAAARYGSGAS
GGVINIITKSPDEASTSITAQTELSSNKYEGDNRRFNLVTSAPLSERFSHRTIVNYNEQDADDPRVNLDATDVTTGRGGT
AKAVGAGREGVENIDVRTLVRFDQDDINRWDFEAAYSRQGNRYAGDNAFQGVSYPVDENGNVIIPEPEDLAETDAQSLIG
EETLVMHRRTFGVTHNGEYDFGDSFSYIQYESTSNSRLGEGSAGGGEGRINSLEMTTIKLENITAKTEWNVPLTLGGFNQ
TATFGAEYRKETLDDSVSNQLSLNVVDDGTIPGVETDPENRPSETDATLVGVYVEDNIMLTDSITLTPGLRFDDHSKADT
NLSPSLNASWQASPNIVVQGGISRAFKAPNLYQLNPNYVYYTRGNGCPVDFSNLGGGCHILGNPDLEHETSVNKEIGVNY
TNEEGLNAGITYFHNDYKDKIGTGNVPPEYVLPGEEGGEANVQVFQWFNVPEAVISGLEGNLLFPVTSTIEWSTNFTVML
ESEDKSTGQPLSIVPDYTVNSLISWQATDALELVLSAQHYGETESPTASVNSGAVIEADDREAYTITNINAIYAFDENLS
FNVSVKNLFNESVKREGTQASNAGANTFNEPERSFLLSATYQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 1e-98 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMEC673_17610 YP_006800577.1 outer membrane receptor FepA VFG0923 Protein 3e-105 43
AMEC673_17610 YP_006800577.1 outer membrane receptor FepA VFG1650 Protein 9e-99 42
AMEC673_17610 YP_006800577.1 outer membrane receptor FepA VFG0935 Protein 2e-98 42