|
Name : O3I_008335 (O3I_008335) Accession : YP_006806604.1 Strain : Nocardia brasiliensis HUJEG-1 Genome accession: NC_018681 Putative virulence/resistance : Unknown Product : major facilitator transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1898520 - 1899848 bp Length : 1329 bp Strand : + Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGACCGACACTCCCACCTCCGGTGCTCGTTTCGCCCGGGTGGTCGCCGCCAGCGTGGCGGGGACGACCATCGAGTTCTA CGACTTCTTCCTCTATGGTCTGGCTGCCGCGCTGGTCTTCAACAAGGTGTTCTTCCCGGCAGACGATCCCTTGGTCGGGG TGCTGCTGGCATTGGCGACCTACGCGGTCGGGTTCTTGGCGCGGCCGCTCGGTGGCGTGCTGTTCGGGCATCTGGGCGAC CGGCTCGGGCGGCGGCGGACCCTATCGATCACGTTGCTGCTGATGGGCGGTGCGACCGTCGCGATCGGATTGATTCCGTC CTACGCCAGCATCGGGGTCGCCGCGCCACTGCTGCTCGTGCTGCTGCGACTGGTGCAGGGCATCGCGCTCGGCGGGGAGT GGGGCGGTGCGGTGCTGCTCGTGGCCGAGCACGGCTCGCCCGCCCATCGCGGTTTCTGGAGCAGCTGGCCGCAAACCGGC GGTCCACTCGGAAACCTCTTGGCCACAGGCGTTCTCGCGGTACTCGGGCTCGGGGTGTCGAACGCCGAATTCCAGGCCTG GGGTTGGCGGATCCCGTTCCTGCTCTCGATCGTGCTGGTGCTGGTCGGCCTCTGGCTGCGGCACGCGGTGGAGGAGTCGC CGATCTTCCTGGAGGCACAGGCCCGCGCCGCGGGCCGGTCCGGACACGCGCCGGTGCGAATCGTGCTGCGCCGCTTTCGC AAACAGGTGCTCATCGCCGCGCTCGCGGACGTCGGCGAGAAGGCCACCTACTACACCTTCAGCATCTTCCTGCTCGCCTA CCTGACCCAGGTCGTCCATGTGCCGAAAAGCACTGTGCTGTCCTCGATCACGATCGCTTCGTGCTTCCAGGCGGCCGCCA TCGTGGCCGGGGGCGCGGTGGGCGACCGGTTCGGGCGACGGCCCACCAGCGTGCTCTTGGCCGGGCTGATCGCGCTCTGG GCCTTCCTCGCGCTGCCGCTGGTGGACGGTGGCCGGTGGACCGTGATCACCGTGGTGATCACCATCGGACTCACCATGCA CGGCCTGCTCACCGGCATCCAGGCACCGTTCTTCGCCGAGCTGTTCCCGAGCGAAGTCCGTTACACCGGAGCGTCTTTGG GCTATCAGCTCGCCACCGTCGTCGGCGGGGCGCTCACCCCGCTGATCGGGGTCGCCCTGCTGGACCGGTACCCGTCCACC GTCCCCGTCTCGCTGCTGCTGTGCGCGATGCTGGCCTGCACCGCCACCGCGTTCCTCTGGGCGGGAGAGACCCGCCGTCT GGACCTGCGCACCATCGCGCACGAGGACGAGCCCACCACGGTGGCCTAG Protein sequence : MTDTPTSGARFARVVAASVAGTTIEFYDFFLYGLAAALVFNKVFFPADDPLVGVLLALATYAVGFLARPLGGVLFGHLGD RLGRRRTLSITLLLMGGATVAIGLIPSYASIGVAAPLLLVLLRLVQGIALGGEWGGAVLLVAEHGSPAHRGFWSSWPQTG GPLGNLLATGVLAVLGLGVSNAEFQAWGWRIPFLLSIVLVLVGLWLRHAVEESPIFLEAQARAAGRSGHAPVRIVLRRFR KQVLIAALADVGEKATYYTFSIFLLAYLTQVVHVPKSTVLSSITIASCFQAAAIVAGGAVGDRFGRRPTSVLLAGLIALW AFLALPLVDGGRWTVITVVITIGLTMHGLLTGIQAPFFAELFPSEVRYTGASLGYQLATVVGGALTPLIGVALLDRYPST VPVSLLLCAMLACTATAFLWAGETRRLDLRTIAHEDEPTTVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-50 | 43 |
