Gene Information

Name : MC28_F223 (MC28_F223)
Accession : YP_006815906.1
Strain :
Genome accession: NC_018688
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 247699 - 248463 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAACAACTCAGTTGTAAATGTAAAAAATGTTCAAAAAGTGTACGGTAAAAAAGGTGAAAATCAGTCCCACGCTTT
AAAAGATGTATCCTTCTCAATTCAAGAAGGAGAATTTGTTGGAATCATGGGACCGTCCGGTTCAGGAAAAACAACATTAT
TAAATGTAATTTCAACATTAGATACTGCAACTGGAGGTGTTGTTGAAATTGCTGGTATCGATATCACTAAAATGAAACAA
GGTGAACTTTCAGATTTCCGTTCTCAAAAATTAGGTTTTATCTTCCAAGATTTTAACTTATTAGAAAATCTATCTATTTA
TGAAAATATTGCTCTTCCACTTTCACTTCAAGGCGTCCCATCGCGTAAGATTGGTCCAAAAGTAAAGAAAGTAGCCAATA
TGTTAGGGATTTCGGAAATACTTCAAAAATATCCATCTGAGGTATCTGGTGGACAAAAACAACGTTCTGCGGCAGCACGA
GCGCTTGTACATGAACCAGCAATTATTTTAGGGGATGAGCCAACAGGTGCATTGGATTCAAAAAATGCAACAAGTCTTTT
AGAAGCAATAAAAAATTTAAATGAAAAACAAGATGTTTCAATTATGATGGTTACCCATGATCCATATAGTGCAAGTTATT
GCCAGCGTATTTTGTTCATCCAAGATGGTGAGCTATATAAAGAAATTCATCGTAGTGGTACACGTGAATCGTTTTATAAA
GAAATTTTAGATGTACTATCGGATTTAGGTACACAAAAAGGATAA

Protein sequence : 
MMNNSVVNVKNVQKVYGKKGENQSHALKDVSFSIQEGEFVGIMGPSGSGKTTLLNVISTLDTATGGVVEIAGIDITKMKQ
GELSDFRSQKLGFIFQDFNLLENLSIYENIALPLSLQGVPSRKIGPKVKKVANMLGISEILQKYPSEVSGGQKQRSAAAR
ALVHEPAIILGDEPTGALDSKNATSLLEAIKNLNEKQDVSIMMVTHDPYSASYCQRILFIQDGELYKEIHRSGTRESFYK
EILDVLSDLGTQKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MC28_F223 YP_006815906.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-39 45
MC28_F223 YP_006815906.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-35 44
MC28_F223 YP_006815906.1 ABC transporter-like protein CP001581.1.gene598.p Protein 8e-38 44
MC28_F223 YP_006815906.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-33 41