Gene Information

Name : ASU2_10725 (ASU2_10725)
Accession : YP_006818512.1
Strain : Actinobacillus suis H91-0380
Genome accession: NC_018690
Putative virulence/resistance : Virulence
Product : toxin RTX-I translocation ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2343341 - 2345464 bp
Length : 2124 bp
Strand : -
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
ATGGATTTTTATCGGGAAGAAGACTACGGATTATACGCACTGACGATTTTAGCCCAGTACCATAATATTGCTGTAAATCC
GGAAGAACTAAAACATAAATTCGACCTTGAAGGAAAAGGCTTAGATCTAACCGCTTGGCTATTAGCCGCAAAATCATTAG
AACTTAAAGCAAAACAAGTAAAAAAAGCGATTGATCGTTTGGCGTTTATCGCACTACCGGCACTTGTATGGCGAGAAGAC
GGTAAACATTTTATTTTGACTAAAATTGATAATGAAGCAAAAAAATATTTAATTTTTGATTTGGAAACGCATAATCCTCG
CATTTTGGAACAAGCGGAATTCGAGAGCTTATACCAAGGAAAACTGATTTTAGTTGCATCAAGAGCTTCCATCGTAGGTA
AGCTGGCAAAGTTTGACTTCACTTGGTTTATACCGGCGGTAATTAAGTATCGTAAGATTTTTATTGAAACGTTAATTGTT
TCAATTTTTTTGCAAATTTTCGCACTAATTACACCGCTTTTTTTCCAAGTCGTGATGGATAAAGTCTTGGTACACCGAGG
TTTTTCAACCTTAAATGTGATTACGGTGGCATTAGCGATCGTCGTGCTGTTTGAAATTGTGCTAAACGGTTTACGTACCT
ATATTTTTGCGCATAGTACCAGCCGTATTGATGTGGAGTTGGGAGCAAGATTATTCAGACATTTATTAGCACTCCCAATC
TCTTATTTTGAAAATCGTCGAGTCGGCGATACGGTGGCTCGTGTACGAGAACTCGATCAAATTCGTAACTTCTTAACCGG
GCAGGCACTTACTTCCGTGTTGGATTTAATGTTTTCCTTTATCTTCTTTGCAGTGATGTGGTATTACAGCCCTAAACTTA
CTCTTGTGATTTTAGGCTCGTTACCGTTTTATATGGGGTGGTCGATTTTTATCAGCCCTATTTTACGTCGCCGTTTAGAT
GAAAAATTCGCACGTGGTGCGGACAATCAGTCATTCTTAGTGGAATCGGTGACTGCAATCAATACGATTAAAGCGTTGGC
GGTTACCCCTCAAATGACTAATACCTGGGATAAGCAATTAGCCAGCTATGTATCGGCGGGATTCCGTGTAACCACATTAG
CTACTATCGGACAGCAAGGTGTACAATTTATTCAAAAAGTCGTGATGGTTATTACCTTATGGCTAGGCGCACATTTAGTG
ATTTCAGGCGATTTAAGTATCGGACAATTAATCGCATTTAATATGTTATCCGGTCAAGTGATTGCACCGGTGATTCGTTT
AGCGCAACTTTGGCAAGATTTCCAACAAGTAGGAATTTCAGTTACTCGTTTAGGTGACGTTTTAAACTCTCCAACCGAAA
GCTATCAAGGGAAATTAGCGTTACCGGAAATTAAAGGCGAGATTAACTTCCGCAATATTCGTTTCCGCTACAAACCGGAT
GCACCAGTGATTTTAAATGATGTGAATTTATCAATTCAGCAAGGTGAAGTTATCGGTATCGTAGGTCGTTCCGGCTCAGG
TAAAAGTACGTTAACGAAATTAATTCAACGTTTCTATATTCCGGAAAACGGTCAGGTATTAATAGATGGGCATGATTTAG
CATTGGCGGATCCGAACTGGCTACGTCGTCAAGTCGGGGTGGTATTACAAGATAACGTACTATTAAATCGTAGTATTCGA
GATAATATTGCCTTAGCGGATCCGGGTATGCCAATGGAAAAAATTGTCCATGCGGCAAAATTAGCCGGCGCTCACGATTT
CATTTCAGAATTGCGTGAAGGCTATAATACGATCGTAGGTGAACAAGGTGCCGGTTTATCCGGTGGACAACGCCAACGTA
TTGCGATTGCGCGTGCTTTAGTGAATAACCCAAAAATTTTGATTTTTGATGAAGCAACCAGCGCATTAGATTATGAATCA
GAACATATCATTATGCGAAATATGCACCAAATTTGTAAGGGACGTACTGTGATTATCATTGCCCACCGCTTATCCACGGT
GAAAAATGCCGATCGTATTATTGTGATGGAAAAAGGACAAATTGTAGAACAAGGTAAACATAAAGAGCTTCTCGCTGATC
CGAATGGTTTATACCACTATCTACATCAATTACAGTCGGAGTAA

Protein sequence :
MDFYREEDYGLYALTILAQYHNIAVNPEELKHKFDLEGKGLDLTAWLLAAKSLELKAKQVKKAIDRLAFIALPALVWRED
GKHFILTKIDNEAKKYLIFDLETHNPRILEQAEFESLYQGKLILVASRASIVGKLAKFDFTWFIPAVIKYRKIFIETLIV
SIFLQIFALITPLFFQVVMDKVLVHRGFSTLNVITVALAIVVLFEIVLNGLRTYIFAHSTSRIDVELGARLFRHLLALPI
SYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLMFSFIFFAVMWYYSPKLTLVILGSLPFYMGWSIFISPILRRRLD
EKFARGADNQSFLVESVTAINTIKALAVTPQMTNTWDKQLASYVSAGFRVTTLATIGQQGVQFIQKVVMVITLWLGAHLV
ISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTESYQGKLALPEIKGEINFRNIRFRYKPD
APVILNDVNLSIQQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIR
DNIALADPGMPMEKIVHAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES
EHIIMRNMHQICKGRTVIIIAHRLSTVKNADRIIVMEKGQIVEQGKHKELLADPNGLYHYLHQLQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 87
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 86
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ASU2_10725 YP_006818512.1 toxin RTX-I translocation ATP-binding protein VFG0907 Protein 0.0 87
ASU2_10725 YP_006818512.1 toxin RTX-I translocation ATP-binding protein VFG1501 Protein 0.0 86
ASU2_10725 YP_006818512.1 toxin RTX-I translocation ATP-binding protein VFG1557 Protein 0.0 86
ASU2_10725 YP_006818512.1 toxin RTX-I translocation ATP-binding protein VFG0841 Protein 0.0 73
ASU2_10725 YP_006818512.1 toxin RTX-I translocation ATP-binding protein VFG1269 Protein 0.0 55