|
Name : secD (ASU2_01470) Accession : YP_006816675.1 Strain : Actinobacillus suis H91-0380 Genome accession: NC_018690 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 321691 - 323538 bp Length : 1848 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAATCGTTTCCCATTATGGAAGAACCTGATGGTTATCATCGTGATACTCATCGGTGGTTTATACGCTCTTCCAAA TTTATACGGCGAAGACCCCTCAGTACAAATTTCAGGTACGCGAGGTCAAGAAGCCACGAGCGAAACGCTCGCTCAAGTTC AGGGAACATTGTCATCAATGAATATCACACCGAAATCAGCCGTTCTTGAGAACGGCTCGATTTTAGTTCGACTTGAAAAT GATGAACAACAATTACCTGCCAAAGAAAAAATTTCTGATGTCTTAGGTGACAAATTCTCTGTTGCACTAAACCTTGCGCC GGCAACACCAAGTTGGTTAACCGATATCGGCGGTAGCCCGATGAAACGAGGCTTAGACCTACGTGGCGGTGTGCGCTTCC TAATGGAAGTGGATATGAATACGGCGTTAACAAAACAACAAGAGAGTTTACAAGACAGCTTACGCAGCGAATTACGTAAA GAAAAATTACAGTATAAAGCGGTTAAAAAAGGCGAAAATTTTGCAACTGTAATTGAATTTGCCGATGCGGATACGGCTGA AAAAGCAGCTCGTTTTGTACGCCGTCAGCATACTTCGCTCGAAGCCTCATTTATTGATACGACTACCGTATCATTTGCAC CTTCCGCAGAAGGCTTATCTGCTTCTCGCGATACAGCAATCGAACAAAACTTATCGATCTTACGTAAACGTGTGGAAGAA TTAGGTGTTTCTGAGCCAACTATTCAACGTCAAGGTGCAGACCGTATCGTAGTTGAATTGCCGGGTGTACAAGATACTGC TCGTGCTAAAGAACTTCTTGGTGCAACTGCAACGCTTGAGTTTCGCTTAGTGAACGCCGAGGCAAGCCCTGAATCTGCTG CTCGAGGTATTGTACCTGCCGACTCAGAATTAAAATTCAGCCGTGATGGCGGCGCTGTTGTATTACGTCGTAAACCGTCT TTAGGCGGTGAACATATTATCGATGCGACATCAGGTAAAGATGAACGAGGTTTACCGCAAGTAAGCATTAACCTTGATGC GGAAGGCGGCCATATGATGGCGGAAATTACCAAAAGTGCAGTAGGCAAACCGATGGCAACCCTTTACAGCGAGTTTAAAG ACTCTGGTCGTAAAGATGCAAAAGGTAAAGTAATCTTAGAAAAACATGAAGAAGTGATTAATGTGGCAACCATTAATTCA CGTCTTGGCAGCCAATTCCAAATTACCGGTATTAACTCACCGGCAGAAGCACAAAACCTTGCGGTTCTTTTACGTTCAGG TGCGTTAATTGCGCCGATTGTCATCGTAGAAGAACGTACTATCGGTGCTTCATTAGGTGCGGATAACGTTGCAAAAGGGA TGGAAGCCGGTATGTATGGCTTAATCTTAACCATCGCATTCTGTTTAATTTACTATAAAGTGTTCGGGCTTTTTGCCGCA GCGGCGCTTACAGTAAATATGGTATTAACCATCGGCTTAATGTCATTAATTGGCGCAACACTCACCATGCCGGGGATCGC CGGTATCGTACTTGCGGTAGGTATGTCGGTGGATGCTAACGTGTTAATTTACGAGCGTATTAAAGAAGAATTGCGTAACG GGCGTTCAGTTCAACAGGCAATTCACGAAGGTTACAATGGAGCCTTCACTTCGATTTTCGACTCAAACTTAACCACGATT TTAACCTCTTTAGTGTTATATGCAGTGGGTACAGGCCCGGTAAAAGGCTTCGCAATTACCCTTGCACTTGGGGTAATGAT TTCAATGTTCACCGCAATTACCGGTACTCGTATGCTTGTTAACTGGGTGTACGGCGGCAATAAACGTGTGAAAAAACTTT GGATTTAA Protein sequence : MLNRFPLWKNLMVIIVILIGGLYALPNLYGEDPSVQISGTRGQEATSETLAQVQGTLSSMNITPKSAVLENGSILVRLEN DEQQLPAKEKISDVLGDKFSVALNLAPATPSWLTDIGGSPMKRGLDLRGGVRFLMEVDMNTALTKQQESLQDSLRSELRK EKLQYKAVKKGENFATVIEFADADTAEKAARFVRRQHTSLEASFIDTTTVSFAPSAEGLSASRDTAIEQNLSILRKRVEE LGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATATLEFRLVNAEASPESAARGIVPADSELKFSRDGGAVVLRRKPS LGGEHIIDATSGKDERGLPQVSINLDAEGGHMMAEITKSAVGKPMATLYSEFKDSGRKDAKGKVILEKHEEVINVATINS RLGSQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVAKGMEAGMYGLILTIAFCLIYYKVFGLFAA AALTVNMVLTIGLMSLIGATLTMPGIAGIVLAVGMSVDANVLIYERIKEELRNGRSVQQAIHEGYNGAFTSIFDSNLTTI LTSLVLYAVGTGPVKGFAITLALGVMISMFTAITGTRMLVNWVYGGNKRVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-123 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-123 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-123 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-123 | 46 |
