Gene Information

Name : B5T_01372 (B5T_01372)
Accession : YP_006819997.1
Strain : Alcanivorax dieselolei B5
Genome accession: NC_018691
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor, ECF subfamily (Sigma-24) transcription regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1458189 - 1458713 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence : 
GTGGATGGCGACACGTCTGAACAAGCGGGATTTTCCAAACTCTATCAAGACCACCATGCCTGGCTGGTCCGCTGGCTGCT
GCGGCGCACCCGGGGCGCCGACAATGCCCAGGATCTCGCGCACGATACGTTCATGCGTCTGCTGGATCGTCCGGCACTCC
CGCACGGCATCCGCAACGCCCGCGCCTGGCTGGCGAAAACCGCCAGCAACCTGGTCGTTGATCAGGCCCGGCGGCAGATA
CTGGAACGAAATTACCTGGCCCTGCTGACCGCCCTGCCCGAGCAGGAGCAACCGTCCCCCGAAGACCAGTGGGAATTGTT
GCAATTACTGGAACGTATCGACAATCTGCTCGACGGCCTCAGGCCGATCGAGAAAAAAACCTTCCTGATGTCACGCCTCG
ACGGTCTGCCCTATCGTAAGATCGCCGAGCGGCTCGGCATCAGTCTGTCGTCGGTGGAGAAGTACATGGCGAAGGCCATG
CTCAAATGCTACACCGCCGCCTATGTGGAGCGGCCGGATTTATGA

Protein sequence : 
MDGDTSEQAGFSKLYQDHHAWLVRWLLRRTRGADNAQDLAHDTFMRLLDRPALPHGIRNARAWLAKTASNLVVDQARRQI
LERNYLALLTALPEQEQPSPEDQWELLQLLERIDNLLDGLRPIEKKTFLMSRLDGLPYRKIAERLGISLSSVEKYMAKAM
LKCYTAAYVERPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B5T_01372 YP_006819997.1 RNA polymerase sigma-70 factor, ECF subfamily (Sigma-24) transcription regulator protein VFG1049 Protein 6e-32 43