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Name : secD (AMBLS11_12970) Accession : YP_006825620.1 Strain : Alteromonas macleodii Black Sea 11 Genome accession: NC_018692 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3030220 - 3032064 bp Length : 1845 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGCTAAACAAAAACTCTATTTGGAAAGTACTGAGTGCACTCATTGTGGTTGCAGTGTGTGCACTTTATGCGCTTCCTAA CATTTACGGTGAAGATCACGCCGTACAAATCTCAGCAGGCCGTGACGCTGTGGTGACTGATGCCACTGTGGAACAAGTAA AAGCCGCGCTAAGTGAAAAGAATATCTCTCCTAAACGTGTTGAGTTTGAGAACGAACAAATATTAGTTCGCGTTTCGGAT TCTGACACCCAGCTTGTTACGCGCGAAACGCTTGAAAAGGCGCTTGGTGATGACTACTACGTGGCTATGAACCTTGCCCC CGACACGCCAGAATGGCTTGAGGGCCTAGGTGGCGCGCCAATGAAGCTAGGTCTTGACCTTCGCGGTGGTGTTCACTTTC TAATGGAAGTGGATATGACCGAAGTAATTGCTAAGTCGCTAGAAGACGCAGAGGGTGGTTTCCGTACTTCACTGCGTGAA GAAGGCATTCGTTATCGCGGTGTAAAACAGGTTGACGATCATATCGACATTACGTTCCGTGATGAAGATGCGCTAGACAA GGCAGAGTTCTTTTTGCGTAACCAAAGCCGCGACCTTACCTTTAATCAAGTAGACGACTTAACGCTTCGCGCTATTTTTG CTGAAAGCAAGCTTCAAGAAATTCGCGACAACGCGGTTAAGCAAAACATTACCATTATTCGTAATCGTGTAAACCAACTT GGTGTGGCTGAGCCGCTTGTACAAAAGCAAGGTGCTGATCGCATTGTTGTGCAGCTTCCGGGTATTCAAGACACCGCCCG TGCGAAAGAGATTCTTAATGCCACAGCAACACTAGAATTTCGCATGGTGGACCAGAAGAACGACATCCGTGATGCATTGA ACGGCCGCGTTCCTCCTGGCTCTCAAGTGATTGAAGATCAGCAAGGCATTCCTCAGCTGCTTGAAAAGCGTATTATGCTT ACCGGTAGCCATATTATTGATGCGAATAGCGGTGTTGATGAGTACGGACTTCCGAACGTAAACATCTCGCTTGACTCTGA AGGCGGTAATAAGATGTCTCGCTCAACCCGTGGCAACATTGGTAAACCAATGGCTACGGTGTTTATCGAATATAAGTCGA CTGGCGAACGTAACAAAGACGGCAAGCTAGTGTTTGAAAAGCACGAGCAAGTTATCTCGGTTGCGACTATTCGTGCGCAA CTGGGTAGCAAGTTCCAAATCACAGGTCTTGATTCGCCGAAAGAAGCCCGTGACTTAGCGTTGCTACTTCGCGCTGGTGC ACTAATTGCGCCAATTCAAATTGTTGAAGAGCGTACGGTTGGACCAAGCTTGGGTAAAGAAAACATTGAGCTGGGCATGC AGGCAATTATGTATGGTCTGGCAGCGGTACTTGTTTTCATGCTGATTTACTATAAAGCGTTTGGTGTGGTAGCGAATATC GCACTGATTACAAACCTGGTTATGATTGTAGGCATTATGTCGATGATCCCTGGTGCAACGCTTACGCTACCGGGTATGGC AGGTATTGTACTGACCGTTGGTATGGCGGTAGATGCAAACGTTCTTATCTACGAACGTATTCGAGAAGAGATACGCGACG GCCGCAGCCCTCAGCAGGCCATCCACCAAGGTTACGACAGTGCATTTTCTACCATTCTAGATGCTAACATTACCACTTTC ATTGCAGGCTTAATTCTATTTGCCGTGGGCACAGGCCCAATTAAAGGCTTCTCGATTACGCTGATGATTGGTATAGCAAC GTCGATGTTTACTGCAATCCTAGTTACGCGCGTTATTGTTAACGCAGTATGGGGCGGTCGACGCGTAGAGAAATTGGCGA TTTAA Protein sequence : MLNKNSIWKVLSALIVVAVCALYALPNIYGEDHAVQISAGRDAVVTDATVEQVKAALSEKNISPKRVEFENEQILVRVSD SDTQLVTRETLEKALGDDYYVAMNLAPDTPEWLEGLGGAPMKLGLDLRGGVHFLMEVDMTEVIAKSLEDAEGGFRTSLRE EGIRYRGVKQVDDHIDITFRDEDALDKAEFFLRNQSRDLTFNQVDDLTLRAIFAESKLQEIRDNAVKQNITIIRNRVNQL GVAEPLVQKQGADRIVVQLPGIQDTARAKEILNATATLEFRMVDQKNDIRDALNGRVPPGSQVIEDQQGIPQLLEKRIML TGSHIIDANSGVDEYGLPNVNISLDSEGGNKMSRSTRGNIGKPMATVFIEYKSTGERNKDGKLVFEKHEQVISVATIRAQ LGSKFQITGLDSPKEARDLALLLRAGALIAPIQIVEERTVGPSLGKENIELGMQAIMYGLAAVLVFMLIYYKAFGVVANI ALITNLVMIVGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIYERIREEIRDGRSPQQAIHQGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAILVTRVIVNAVWGGRRVEKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-123 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-124 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-124 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-124 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-124 | 47 |
