Gene Information

Name : glcF (C380_01385)
Accession : YP_006852641.1
Strain : Acidovorax sp. KKS102
Genome accession: NC_018708
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 306819 - 308072 bp
Length : 1254 bp
Strand : +
Note : COG0247 Fe-S oxidoreductase

DNA sequence :
ATGCAAACCCAGCTCTCCCCTGAATACCGTGCCCGCGCCGATGGCCTGGAGGCCGAATCCATCCTGCGCAAATGTGTGCA
CTGCGGCTTTTGCACTGCCACCTGCCCCACCTACCAGCTGCTGGGCGACGAGCTGGACGGCCCGCGCGGCCGCATCTACC
TCATCAAGCAAGTGCTTGAAGGCGCCGAGCCCACGCGCAAGACCCAGATGCACCTGGACCGGTGCCTCACCTGCCGCAAC
TGCGAAAGCACCTGCCCCAGCGGCGTGCAATACGGCCACCTGGTCGATATTGGCCGCAAGATCGTCGATGAAAAAGTGCC
CCGCCCCGTGGGCGAAAAGGCCCTGCGCTGGGCGCTGAAAGAGGGCCTGCCATCGCCCCTTTTCGCCCCCGCCATGAAGG
CCGGGCAAATGGTGCGTGGCCTGCTGCCCGAGTCGCTCAAGGCCAAGGTTCCCGCACCGCAGGACGCAGGCGCCTGGCCC
ACGCGCGAACATGCGCGCAAGGTGCTCATGCTGGCGGGCTGCGTGCAACCGGCCATGATGCCCAACATCAACACGGCCAC
CGCCCGCGTGCTCGACGCCGTGGGCATCCAGACCGTGATCGCATCCAAGGCCGGCTGCTGCGGCGCCGTCAAGTTCCACC
TCAACGACCAGGCCGGCGGCATGGCCGAGATGCGCGCCAACATCGATGCCTGGTGGCCGCTGGTGGATGCGGGTGGGGTC
GAGGCCATCGTCATGAACGCCTCGGGCTGCGGCGTCACCGTCAAGGAATACGGCCACATCCTGAAGGACGACCCACAGTA
CGCAGCCAAGGCCGAACGCATCAGCGCCCTCACGCGCGACCTGTCGGAACTGCTGCCCGCCCTGCTGCCCGAGCTGGCCA
CCAAGCTGCAGGGCCGTGTGAACCAGCCGGACACCCTGTACGCCTACCATCCCCCTTGCACCCTGCAGCACGGGCAAAAA
CTGCGCGGCGGGGTGGAGACGTACCTGAACCAGCTGGGCTTCAAGCTGCGCACCGCGCGCAACGATGCCCACCTGTGCTG
CGGCTCGGCCGGCACATACTCGGTGCTCAACCCCGACCTGTCGTACCAGCTGCGCGACCGCAAGCTCGGCGTGCTCGGCG
AAGCCTTCGGCAACCAGCCGCCCGACATGATCCTGTCTGCCAACATCGGCTGCATCACCCACCTGCAAAGTGGCACGGGC
ACGCCTGTGCGGCACTGGGTGGAGGTGCTGGACGAGGCGCTATTGGGGCCGTGA

Protein sequence :
MQTQLSPEYRARADGLEAESILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGAEPTRKTQMHLDRCLTCRN
CESTCPSGVQYGHLVDIGRKIVDEKVPRPVGEKALRWALKEGLPSPLFAPAMKAGQMVRGLLPESLKAKVPAPQDAGAWP
TREHARKVLMLAGCVQPAMMPNINTATARVLDAVGIQTVIASKAGCCGAVKFHLNDQAGGMAEMRANIDAWWPLVDAGGV
EAIVMNASGCGVTVKEYGHILKDDPQYAAKAERISALTRDLSELLPALLPELATKLQGRVNQPDTLYAYHPPCTLQHGQK
LRGGVETYLNQLGFKLRTARNDAHLCCGSAGTYSVLNPDLSYQLRDRKLGVLGEAFGNQPPDMILSANIGCITHLQSGTG
TPVRHWVEVLDEALLGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 2e-109 57