Gene Information

Name : Ngar_c33610 (Ngar_c33610)
Accession : YP_006863933.1
Strain : Candidatus Nitrososphaera gargensis enrichment culture Ga9.2
Genome accession: NC_018719
Putative virulence/resistance : Resistance
Product : ABC efflux transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2633630 - 2634490 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGAAGAACATCATCATCCCACGGGCAGAGGCAACAGCATGTTAAATGATCCTCCTGCCGGAAAAGAGAGCCATGC
TCCGTCATCATCCCGTCTGCATCCTACTACTGCTACCACTACCACTGTCGCTCTAAGGCTGGAAAATGTAAAGAAAGTGT
TTGATTCGCGCTCGGCTTCAGCCAAAAAAGTGGTGGCCCTTGACGGCATCAGCTTTGAAATAAAGAAGGGCGAGTTTGTC
TCTATAGTCGGCCCCTCGGGCAGCGGCAAGTCCACCCTCCTGAACATCATAGGAGCCCTTGATAGGCCCACTGCCGGAAA
GGTGTTCATAAACGGGCAAGACATCTTTCTGCTAGATGACACAAGGCTTTCTGATATCAGAAACCGCTTGATCGGATTCA
TCTTCCAATCATACAACCTTGTCAATAGAATGTCTGTCCAAGAAAATGTCGAGTTTCCGGCAGTCTTTTCCCCAGCGAGA
CCATCATCATTCTCTTTTGACAAAAGTGCCCGGGCACTGGAGCTGCTTGAAATCCTTGGGATAAAGGACAAGGCAAAGCA
AAAGCCGGTGGACCTGAGCGGAGGGGAGCAGCAAAGGGTGGCGATTGCAAGAGCCCTGATAAACGACCCGGCTCTAGTCT
TGGCAGACGAGCCTACTGGAAACCTTGACACCAAGACTGGAAGAGAGGTATTTGATCTTCTCAGGATGCTGTCTGATAGG
TTTGGCACCACGGTTGTAATGGTCACGCATAATCTGGAGCTGGCAGGCATGACTGACAAGTCGATCTATATCCGGGACGG
GAGGGTGGAGAAGGAAGAAAAATGTCGCGCACCGCCGCGACAGGAGCCAGCTAAGGCATGA

Protein sequence : 
MKEEHHHPTGRGNSMLNDPPAGKESHAPSSSRLHPTTATTTTVALRLENVKKVFDSRSASAKKVVALDGISFEIKKGEFV
SIVGPSGSGKSTLLNIIGALDRPTAGKVFINGQDIFLLDDTRLSDIRNRLIGFIFQSYNLVNRMSVQENVEFPAVFSPAR
PSSFSFDKSARALELLEILGIKDKAKQKPVDLSGGEQQRVAIARALINDPALVLADEPTGNLDTKTGREVFDLLRMLSDR
FGTTVVMVTHNLELAGMTDKSIYIRDGRVEKEEKCRAPPRQEPAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ngar_c33610 YP_006863933.1 ABC efflux transporter, ATP-binding protein CP001581.1.gene598.p Protein 2e-41 48
Ngar_c33610 YP_006863933.1 ABC efflux transporter, ATP-binding protein CP001581.1.gene798.p Protein 4e-47 46
Ngar_c33610 YP_006863933.1 ABC efflux transporter, ATP-binding protein NC_012469.1.7686878. Protein 2e-42 42
Ngar_c33610 YP_006863933.1 ABC efflux transporter, ATP-binding protein NC_008702.1.4606598. Protein 2e-33 42