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Name : P700755_002581 (P700755_002581) Accession : YP_006868079.1 Strain : Psychroflexus torquis ATCC 700755 Genome accession: NC_018721 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase beta subunit RpoB Function : - COG functional category : - COG ID : - EC number : - Position : 2767921 - 2771733 bp Length : 3813 bp Strand : + Note : - DNA sequence : ATGTTAGCAATTCATAATGAAAGAATTAGTTTTTCTTCCGTACAAAACAAGCCAGATTATCCAGATTTTCTGGATATCCA AGTTAAATCTTTTCAAGATTTTTTTCAGCTTGAAACTAAACCAGAAGAAAGATCCAACGAAGGCTTATATAATACCTTCA AAGAAAATTTCCCAATTACAGATACGAGAAATCAATTTGTACTTGAATTTTTAGATTACTTTGTAGATCCTCCAAGATAT TCGATACAAGAATGTATTGAAAGAGGTCTTACTTACAGTGTGCCTTTAAAGGCGAGATTAAAACTTTACTGTACTGATCC AGAACACGAGGATTTTGAAACGATTGTACAGGACGTCTATTTAGGGACTATTCCCTATATGACACCCAGTGGTACGTTTG TGATTAATGGAGCAGAGCGTGTTGTTGTTTCACAATTACACAGATCACCAGGTGTATTTTTTGGTCAGTCTTTCCATGCT AACGGAACTAAGCTATATTCCGCTAGAGTTATTCCTTTTAAAGGATCGTGGATTGAATTTGCGACTGATATAAATTCTGT GATGTATGCCTACATCGACAGGAAAAAGAAATTACCTGTTACTACACTTTTTAGAGCTATAGGTTTTGAAAGGGATAAAG ATATTTTAGAAATATTTGATCTTGCTGAAGAAGTCAAAGTTTCAAAAACAGGTCTTAAAAAATACCTTGGTAGAAAATTA GCTGCAAGGGTTTTAAATACATGGTATGAAGATTTCGTAGATGAAGATACAGGAGAGGTAGTGTCGATTGAAAGAAATGA AATCGTACTCGACCGTGATACCGTTTTAGAAAAAGACCATATTGAAGAGATTTTAGAAACGGGTTCAAAAACGATCTTAC TTCACAAAGAAGAGAATTTGACCGGTGACTATGCCATCATATACAATACATTACAAAAAGATCCTACTAACTCTGAAAAA GAAGCAGTAGAGCATATTTATAGACAACTTCGTAATGCTGAGCCGCCTGATGAAGAAACAGCTAGAGGTATTATTGATAA GTTGTTTTTCTCAGATCAACGTTACAACTTAGGTGAAGTTGGTCGTTATAGAATGAATAAAAAGCTAGGTCTTAATATCA GTATGGACAGTAAGGTCCTTACAAAATTAGATATTATTACCATCATCAAGTATCTAATAGAACTTGTTAATTCCAAAGCT GAAGTTGACGATATTGACCACCTTTCTAACCGTCGTGTAAGAACAGTTGGTGAGCAATTGTCTCAACAATTTGGTGTTGG TTTAGCTAGGATGGCAAGAACCATTAGAGAGAGAATGAATGTTAGAGATAATGAAGTCTTTACACCAATTGACTTGATTA ATGCGAAGACATTGTCATCTGTCATCAATTCTTTCTTTGGAACAAATCAGTTGTCTCAGTTTATGGATCAAACCAATCCA TTGGCTGAATTAACTAATAAACGTAGGCTTTCTGCTTTAGGACCTGGAGGTTTATCTAGAGAAAGAGCTGGGTTTGAGGT TCGTGATGTTCACTATACTCACTACGGAAGGCTTTGCCCTATTGAAACTCCTGAAGGCCCAAACATTGGTTTGATTTCTT CAATGTCAGTTTATGGAAAAGTGAACAGTATGGGATTTATCGAAACTCCATACCGTAAGGTTGAAAATGGAAAAATTGAT TTTAAATCAGATCCTTTATACCTTTCAGCAGAAGAGGAAGAAAATAAATTGATTGCGCAGGCCAATATCCCTATTTCAGA AGATGGAGCTATCACTTCAGAACGTGTTATTGCACGAATGGAAGGTGACTTCCCTGTTGTAGATCCAAAAGATGTGGATT ATATTGATGTTGCACCTAACCAGATTTCATCGATCTCTGCTTCATTAATTCCATTTCTGGAACACGATGATGCCAACCGA GCTTTGATGGGATCTAACATGATGCGTCAAGCACTTCCATTATTGAGAGTAGATGCTCCTATCGTAGGAACAGGACTTGA AAGAAGAGTTGCTCAAGATTCAAGAGTCTTGATCAATGCCGAAGGTGAAGGGCGTGTTCAGTATGTTGATGCTAGAAAAA TCATCATAGATTACGACAGAACTGAAAATGAAAGACTTGTTAGTTTTGACGAAGATCACAAAACTTATAATCTGATTAAA TTCAGAAAAACAAACCAAGGTTCTACGATTAACCTAAAACCTATCGTTCGCGTTGGTGATAGAGTTACTAAAGGACAAGT TCTTTGTGAAGGTTATGCAACAGATAATGGAGAGCTAGCTTTAGGTAGAAATATGAAAGTGGCATTTATGCCATGGAAAG GCTATAACTTTGAGGATGCTATTGTAATTTCTGAGCGTGTGGTTAAAGATGATATTTTAACTTCAGTTCATATCGATGAG TATTCTTTAGAAGTGAGAGATACCAAGCTTGGTAATGAAGAATTGACCAGCGATATTCCAAACGTTTCTGAAGAAGCGAC TAAAGATTTGGATGAGCATGGTATGATAAGAATAGGTGCAGAAATTAAGCCTGGAGATATCCTCATCGGTAAGATCACAC CAAAAGGTGAAAGCGATCCTACTCCTGAAGAGAAATTACTGAGAGCTATATTTGGAGACAAAGCTGGCGATGTAAAAGAT GCTTCTTTAAAAGCTTCTCCTTCACTTAACGGTGTCGTTATTGACAAAAAATTGTTTACTCGAGCTGTTAAAGATAAGCG TAAGCGTGCTCAGGATAAACAAGAGATTGATGCTTTGGAAGGAAATTTCCAAATTAAATTTGAAGATCTAAGAAACCGTT TGATAGATAAGTTATTCGGAATTGTAGGAGGAAAAACTGCTCAAGGTGTACAAAATGATTTAGGGGAAGATACTCTGCCA AAAGGTAAGAAGTATACGTTGAAGATGTTGAATTCTGTGGAAGATTTCAGTCACTTAACTAAAGGGACTTGGACTACAGA TAAAGGCACCAATGCTTTAGTAGCAGATCTACTGCACAACTATAAAATCAAGCAAAACGACCTTCAAGGAAACCTTAGAA GAGAGAAGTTTACTATAACAGTTGGAGATGAACTTCCATCTGGTATTCTAAAACTCGCTAAAATTTACGTAGCTAAGAAG CGTAAATTGAAAGTAGGTGATAAGATGGCTGGTCGTCACGGAAACAAAGGTATTGTCGCTAAAATCGTAAGAGAAGAGGA TATGCCATTTTTGGACGATGGAACTCCTGTAGATATCGTATTGAATCCATTGGGCGTACCATCGCGTATGAACATTGGAC AGATCTACGAAACTGTACTAGGTTGGGCTGGACAAAAATTAGGTAAGAAATTTGCAACTCCAATTTTTGATGGAGCCACT TTAGACCAAATTAATGAATTGACCGACGAAGCTGGAATTCCAAGATTTGGACATACGTATCTTTTTGATGGTGGAACTGG TGAGCGTTTTGATCAACCTGCAACTGTAGGTGTGATTTATATGCTGAAACTAGGTCATATGATTGAAGATAAAATGCACG CTAGATCTATAGGACCTTATTCTTTAATCACACAGCAACCTCTAGGTGGTAAAGCACAATTTGGTGGACAGCGTTTTGGT GAGATGGAAGTTTGGGCTTTAGAAGCTTACGGAGCGTCTGCCACATTAAGAGAAATTTTGACTGTAAAATCTGATGATGT TGTCGGTAGAGCCAAAACTTACGAAGCAATCGTAAAAGGTGAACCAATGCCAGAGCCAGGATTACCAGAATCTTTCAATG TATTGATGCACGAATTGAAAGGTCTAGGACTAGATATCAGATTAGAAGAGTAA Protein sequence : MLAIHNERISFSSVQNKPDYPDFLDIQVKSFQDFFQLETKPEERSNEGLYNTFKENFPITDTRNQFVLEFLDYFVDPPRY SIQECIERGLTYSVPLKARLKLYCTDPEHEDFETIVQDVYLGTIPYMTPSGTFVINGAERVVVSQLHRSPGVFFGQSFHA NGTKLYSARVIPFKGSWIEFATDINSVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLAEEVKVSKTGLKKYLGRKL AARVLNTWYEDFVDEDTGEVVSIERNEIVLDRDTVLEKDHIEEILETGSKTILLHKEENLTGDYAIIYNTLQKDPTNSEK EAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYNLGEVGRYRMNKKLGLNISMDSKVLTKLDIITIIKYLIELVNSKA EVDDIDHLSNRRVRTVGEQLSQQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNP LAELTNKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSMSVYGKVNSMGFIETPYRKVENGKID FKSDPLYLSAEEEENKLIAQANIPISEDGAITSERVIARMEGDFPVVDPKDVDYIDVAPNQISSISASLIPFLEHDDANR ALMGSNMMRQALPLLRVDAPIVGTGLERRVAQDSRVLINAEGEGRVQYVDARKIIIDYDRTENERLVSFDEDHKTYNLIK FRKTNQGSTINLKPIVRVGDRVTKGQVLCEGYATDNGELALGRNMKVAFMPWKGYNFEDAIVISERVVKDDILTSVHIDE YSLEVRDTKLGNEELTSDIPNVSEEATKDLDEHGMIRIGAEIKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKD ASLKASPSLNGVVIDKKLFTRAVKDKRKRAQDKQEIDALEGNFQIKFEDLRNRLIDKLFGIVGGKTAQGVQNDLGEDTLP KGKKYTLKMLNSVEDFSHLTKGTWTTDKGTNALVADLLHNYKIKQNDLQGNLRREKFTITVGDELPSGILKLAKIYVAKK RKLKVGDKMAGRHGNKGIVAKIVREEDMPFLDDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGQKLGKKFATPIFDGAT LDQINELTDEAGIPRFGHTYLFDGGTGERFDQPATVGVIYMLKLGHMIEDKMHARSIGPYSLITQQPLGGKAQFGGQRFG EMEVWALEAYGASATLREILTVKSDDVVGRAKTYEAIVKGEPMPEPGLPESFNVLMHELKGLGLDIRLEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 46 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_009085.4918494.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP000675.2.gene392.p | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_010611.6233925.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_011595.7060572.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_010410.6003841.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_011586.7046027.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_010400.5987325.p0 | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP001138.1.gene4362. | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_002695.1.914942.p | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP000034.1.gene3741. | Protein | 0.0 | 46 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_002516.2.881699.p | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_008702.1.4609796. | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP001918.1.gene250.p | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP004022.1.gene2794. | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP000647.1.gene4402. | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | CP002695.1.gene18.p0 | Protein | 0.0 | 45 |
| P700755_002581 | YP_006868079.1 | DNA-directed RNA polymerase beta subunit RpoB | NC_011035.1.6448762. | Protein | 0.0 | 44 |
