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Name : glcD (BN117_1817) Accession : YP_006895769.1 Strain : Bordetella parapertussis Bpp5 Genome accession: NC_018828 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1991160 - 1992659 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAACACCTTGGTGGATGCCGGTTTTTCGCCCAGGCGGGAAGGCTTTGCGCCTCAGCCGCTGATCGAGGCCTTGCTGTC GATACTGCCCGCGCATTGCGTGCTGCATCGCGAAGAGGACACACGCCCGTACGAGTGCGACGGCCTGTCGCTGTACCGGG CGCTGCCGGCGGTGGTGGCCCTGCCGGAAGACGAGGCGCAGGTGCGCGCCATCATGCAGCTGTGCAAGCGCATGAACGTG TCGATCGTGGCGCGCGGCGCGGGGACCGGTCTGTCGGGCGGGGCCATGCCGCACGCGCAGGGCGTGCTGCTGGGGCTGTC CAAGCTCAACCGTATCAAGCGCATAGACCCCGCCGGCGGCACGGCCGTGGTCGAGCCGGGCGTGCGCAACCTGGCCATTT CCGAAGCCGCCGCGCCTTACGGGCTTTACTACGCCCCGGACCCATCCAGCCAGATCGCCTGTTCGATCGGCGGCAACGTG GCCGAGAACTCCGGCGGCGTACATTGCCTCAAGTACGGGCTGACGGTACACAACGTGCTGCGCGTGCGTGTGGTGACCAT CGACGGGGAGATCGTCGAGCTCGGCTCGGAAGCGCCCGATGCGCCCGGCCTGGACCTGCTGTCGGTGTTCGTCGGCTCCG AAGGCATGCTGGGCGTGGTGACCGAAATCACGGTCAAGCTGATTCCCTCGCCGGCCTGCGCGCAAGTGGTCATGGCCAGC TTCGCCAGCGTCGAAGCGGCGGGCAACGCGGTCACGCAGATCATTGCCGCAGGCCTGATCCCGGCCGGGCTGGAGATGAT GGACCGCCAGGCGGTCCACATGGTCGAGCCCTTCGTGCAGGCGGGCTACGACCTCCAGGCGCAGGCCATCCTGCTGTGCG AGGCCGACGGCACGCCGCAGGAGGTGGCCCACGAGGTCGCCATGATGGAGGCGGTATTCAAGCGGGCCGGCGCGACGCGC CTGCAGGTATCGGGCTCGGAAGCCGAGCGCCTGCGCTTCTGGGCCGGCCGCAAGAATGCCTTTCCCGCCGCCGGCCGCGT GTCGCCCGACTACTATTGCATGGACGGCACGATTCCCCGGCGCCACCTGGCGCGCGTGCTTGGCGCCATCGAGCAGATGG AAGACGATTTCGGCCTGCGTTGCGCCAACGTGTTCCATGCCGGCGATGGCAATCTGCATCCCCTGATACTGTTTGATTCG AACAAGCCCGATGAGGTCGAGCGCGCCGAGAAGTTCGGCGCCGCCATTCTCGAGCTGTGCGTGCAGGTTGGAGGCACCGT GACCGGAGAGCACGGTGTGGGTATGGAGAAAATAAATCAAATGTGCGTGCAATTCTCGCGTGACGAACTCGATGCCTTCC TGGCGGTCAAGCGGGCGTTCGACCCGCCCGGCCTGCTCAACCCTGAAAAGGTCATACCCACGCTGGCACGCTGCGCCGAA TACGGCAAGATGCACGTGCATGCCGGCGAAATGAGATTTCCCGATCTGGCGCGCTTCTAG Protein sequence : MNTLVDAGFSPRREGFAPQPLIEALLSILPAHCVLHREEDTRPYECDGLSLYRALPAVVALPEDEAQVRAIMQLCKRMNV SIVARGAGTGLSGGAMPHAQGVLLGLSKLNRIKRIDPAGGTAVVEPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNV AENSGGVHCLKYGLTVHNVLRVRVVTIDGEIVELGSEAPDAPGLDLLSVFVGSEGMLGVVTEITVKLIPSPACAQVVMAS FASVEAAGNAVTQIIAAGLIPAGLEMMDRQAVHMVEPFVQAGYDLQAQAILLCEADGTPQEVAHEVAMMEAVFKRAGATR LQVSGSEAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDDFGLRCANVFHAGDGNLHPLILFDS NKPDEVERAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSRDELDAFLAVKRAFDPPGLLNPEKVIPTLARCAE YGKMHVHAGEMRFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 9e-143 | 61 |
