Gene Information

Name : fecI (BN117_3172)
Accession : YP_006896984.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Virulence
Product : ECF-family sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3419585 - 3420118 bp
Length : 534 bp
Strand : -
Note : -

DNA sequence :
GTGCCTGCCAGCCTGATCACTTCGCCCTCCGCCCGTCCCGCCGCCGACACCGCCGCGGTGGAGGGCCTGTACCGCCAGCA
CCGGTCGTGGCTGGCCGGGTGGCTGCGGCGGCGGCTGGGCTGTCCGCACCGCGCCGAGGACCTGACGCAGGATGTGTTCG
TGCGCGTGATCCAGGGGCGCAAGGCGGTACGCATGGAGCAGGCGCGCGCCTTGCTGGCCACCATCGCCAAGGGACTGGTC
ATCGATCACCAGCGCCGCGCGGCGCTGGAGCACGCTTATCTGGAATACCTGGCGGCGCAGCCGTCGGGGCACGCGCCTTC
GCCGCAACAGCAGGCCGAGCTGCTGCAGGCGCTGGCCGAGCTCGATCGCCTGCTCGAAGGCTTGCCGCCGCGCGCCCGCG
CGGTGTTCCTGATGTCGCAGCTCGAAGGGCTGGGCTATGCCGAGATCGCGCAACGCCTGCGCATTTCGCTCAGTTCGGTG
CAGCAATACATGCTGCGCGCCATGAGCGCTTGTTACATGGCATTCCATGAGTAG

Protein sequence :
MPASLITSPSARPAADTAAVEGLYRQHRSWLAGWLRRRLGCPHRAEDLTQDVFVRVIQGRKAVRMEQARALLATIAKGLV
IDHQRRAALEHAYLEYLAAQPSGHAPSPQQQAELLQALAELDRLLEGLPPRARAVFLMSQLEGLGYAEIAQRLRISLSSV
QQYMLRAMSACYMAFHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_006896984.1 ECF-family sigma factor VFG1049 Protein 2e-22 43