|
Name : cyaB (BN117_0319) Accession : YP_006894394.1 Strain : Bordetella parapertussis Bpp5 Genome accession: NC_018828 Putative virulence/resistance : Virulence Product : cyclolysin secretion ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 331696 - 333903 bp Length : 2208 bp Strand : + Note : - DNA sequence : GTGGATCACGGCCCGCCTGCCTCGCGCGGCGGCGCCGTCTCTTTGCGTTTTTTCCCCGAGGTATTTCCCATGACGTCGCC CGTGGCGCAATGCGCCAGCGTGCCCGATTCCGGGTTGCTCTGCCTGGTCATGCTGGCTCGCTATCACGGATTGGCAGCCG ATCCCGAGCAGTTGCGGCATGAGTTCGCCGAGCAGGCATTCTGTGGCGAGACGATACAGCTGGCGGCGCGCCGGGTCGGC CTGAAAGTGCGGCGGCACCGACCCGCGCCAGCGCGGCTGCCACGCGCGCCGCTGCCGGCCATCGCGCTGGACCGGCAGGG CGGCTACTTTGTTCTTGCCCGCTTCGAGTCCGGCGCGGACCAGGCCGTACTCATCCAGCGTCCGGGCCAGGCGCCCGCGC GCCTGGGGCAGGCCGAGTTCGAGGCGCTGTGGGCGGGAGAGCTGCTGCTTTGTGCTTGCGCGGCCAGCCCGACGCAGGCC CTGGCGCGCTTTGACTTCAGCTGGTTCATTCCGGCGCTGGTCAAGCATCGCCATCTCATCGGCGAGGTGCTGCTGATTTC GTTGGTGCTGCAGTTCATTGCCCTGTTGACGCCCTTGTTCTTCCAGGTGGTCATGGACAAAGTGCTGGTCAACAACGCCA TGGAAACGCTCAATGTCATCGCAGTGGGGTTCCTGGCGGCCATCCTGTTCGAGGCCCTGTTGACCGGCATACGTACTTAC CTGTTCGCGCATACCAGCAGCAAGCTGGATGTGGAGCTGGGCGCGCGCCTTTACGCGCATCTGCTGCGCTTGCCGCTGGC GTACTTCCAGGCGCGCCGGGTGGGCGACTCGGTGGCCCGCGTGCGCGAACTGGAAAACATCCGCGCCTTTCTTACCGGCA ATGCCGTGACGGTGCTGCTCGATGTGGTGTTTTCCGTCGTGTTCATCGCCGTCATGTTCTTCTACAGCGTGAAGCTGACG CTGGTCGTGCTGGCGGCGCTGCCTTGCTATTTTCTTCTGTCGCTGGTGCTGACGCCGGTGCTGCGCCGCCGCCTGGATGT CAAGTTCAACCGTGGCGCCGAGAACCAGGCCTTCCTGGTGGAGACCGTCAGCGGCATCGATACCGTCAAGTCGCTGGCGG TCGAGCCGCAGTGGCAGCGGCACTGGGACCGACAGCTTGCCGGCTACGTCGTGGCCGGCCTGTCGGTGGCTAACGTCGCC ATGCTGGCCAACACCGGCGTAACGCTGATCAGCCGGCTGGTTGCGCTGGGAGTCCTGTGGGTGGGCGCCACCGAGGTGGT CGCGCAGCGCATGACCGTGGGTGAACTGGTGGCCTTCAACATGCTGTCCGGCCATGTGACGCAACCCGTGATCCGGTTGG CGCAGCTGTGGAACGATTTCCAGCAGACCGGCGTTTCGATGCAGCGTCTGGGCGACATCCTGAACTGCCGTACCGAGGTG GCCGGCGACAAGGCGCAATTGCCGGCGCTGCGCGGTTCCATCGAGCTGGACCGGGTATCGTTTCGCTATCGGCCGGACGC CGCCGATGCGCTGCGCAATGTCAGCCTGCGCATTGCGCCGGGCGAAGTGGTGGGTGTGGTAGGGCGTTCCGGGGCGGGCA AGAGTACGCTGACTCGGCTGATACAGCGCATGTTCGTCGCCGACCGCGGCCGGGTGCTGATCGACGGCCATGACATCGGC ATCGTGGACAGTGCTTCGCTGCGGCGCCAGCTGGGCGTTGTGCTGCAGGAAAGCACGCTGTTCAACCGCAGCGTACGCGA CAACATTGCGCTGACCCGCCCCGGCGCGAGCATGCACGAAGTGGTGGCGGCGGCGCGGCTGGCGGGAGCGCACGAGTTCA TCTGCCAGTTGCCTGAAGGCTACGACACCATGCTGGGCGAAAACGGCGTGGGATTGTCGGGCGGCCAGCGCCAGCGCATC GGCATCGCCCGCGCGCTGATCCATCGCCCACGCGTGCTGATCCTGGACGAGGCCACCAGCGCGCTGGACTACGAGTCGGA GCACATCATCCAGCGCAATATGCGCGATATCTGCGACGGCCGCACCGTGATCATCATCGCCCACCGGCTCTCCGCCGTGC GCTGCGCCGATCGCATCGTCGTGATGGAGGGCGGCGAGGTGGCCGAGTGCGGCAGCCACGAAACGCTGCTGGCCGCCGGC GGCCTGTACGCGCGCCTGCAGGCGCTGCAGGCAGGGGAGGCGGGATGA Protein sequence : MDHGPPASRGGAVSLRFFPEVFPMTSPVAQCASVPDSGLLCLVMLARYHGLAADPEQLRHEFAEQAFCGETIQLAARRVG LKVRRHRPAPARLPRAPLPAIALDRQGGYFVLARFESGADQAVLIQRPGQAPARLGQAEFEALWAGELLLCACAASPTQA LARFDFSWFIPALVKHRHLIGEVLLISLVLQFIALLTPLFFQVVMDKVLVNNAMETLNVIAVGFLAAILFEALLTGIRTY LFAHTSSKLDVELGARLYAHLLRLPLAYFQARRVGDSVARVRELENIRAFLTGNAVTVLLDVVFSVVFIAVMFFYSVKLT LVVLAALPCYFLLSLVLTPVLRRRLDVKFNRGAENQAFLVETVSGIDTVKSLAVEPQWQRHWDRQLAGYVVAGLSVANVA MLANTGVTLISRLVALGVLWVGATEVVAQRMTVGELVAFNMLSGHVTQPVIRLAQLWNDFQQTGVSMQRLGDILNCRTEV AGDKAQLPALRGSIELDRVSFRYRPDAADALRNVSLRIAPGEVVGVVGRSGAGKSTLTRLIQRMFVADRGRVLIDGHDIG IVDSASLRRQLGVVLQESTLFNRSVRDNIALTRPGASMHEVVAAARLAGAHEFICQLPEGYDTMLGENGVGLSGGQRQRI GIARALIHRPRVLILDEATSALDYESEHIIQRNMRDICDGRTVIIIAHRLSAVRCADRIVVMEGGEVAECGSHETLLAAG GLYARLQALQAGEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 53 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 53 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cyaB | YP_006894394.1 | cyclolysin secretion ATP-binding protein | VFG1269 | Protein | 0.0 | 99 |
| cyaB | YP_006894394.1 | cyclolysin secretion ATP-binding protein | VFG1557 | Protein | 0.0 | 53 |
| cyaB | YP_006894394.1 | cyclolysin secretion ATP-binding protein | VFG1501 | Protein | 0.0 | 53 |
| cyaB | YP_006894394.1 | cyclolysin secretion ATP-binding protein | VFG0907 | Protein | 0.0 | 53 |
| cyaB | YP_006894394.1 | cyclolysin secretion ATP-binding protein | VFG0841 | Protein | 8e-177 | 52 |
