Gene Information

Name : glcB (BN117_0095)
Accession : YP_006894188.1
Strain : Bordetella parapertussis Bpp5
Genome accession: NC_018828
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 92199 - 94376 bp
Length : 2178 bp
Strand : -
Note : -

DNA sequence :
ATGACTGAACGCATCCCGCATCATGGCCTGCAAGTGGCGGCCTCCCTGCACCGTTTCATCGAAGACGAGGCGTTGTCCGG
CAGCGGCCTGGCGCCCGACGAGTTCTGGGCCGGCTTCGCCGCCCTGGTGCGCGACCTCGCGCCGCGCAACCGAGAACTGC
TGGCCGAGCGCGACCGCCTGCAGGGCGAAATCGACGCCTGGCACCGCGCCCATCCCGGCCCCGTGCGCGACAGCGCCGGG
TATCAGGCGCTGCTCGAACGCATCGGCTACCTGCAGCCCCAGCCAGCACAGGTGACCGCCAGTACCCGCGACGTGGACAG
CGAGATCGCCAGCCAGGCCGGCCCGCAGCTGGTGGTTCCCGTCTCCAACGCGCGCTATGCGCTGAACGCGGCCAACGCCC
GCTGGGGCAGCCTGTACGACGCGCTCTATGGCACCGACGCGATCCCGCCGGTGGCCGGCGATGACAGCAAGGGCTACAAC
CCGGCGCGCGGCGAAGCCGTGATCGCCCGCGCGCGCGCCTTCCTGGACGAGGCGGCGCCGCTGGCCCAGGGTTCGCACGC
CGACGCCACCGCCTACGCCATCGAGGGTGGCAAGCTGGCGGTCACGCTGGGCGCCGGCCAGCGCACGGGCCTGCGCAACC
CCGCGCAACTGGCCGGCTATCAGGGCGACGCCTCGCAACCGGCCGCCGTGCTGCTGGCCAACAACGGCCTGCACTTCGAA
ATCCAGATCGACCGCCAGCACCAGATCGGCGCCACCGATGCCGCCGGCGTCAAGGACGTGCTGCTCGAGGCCGCCCTGAC
CACCATCATGGATTGCGAAGACTCCGTGGCGGCCGTCGATGCCGACGACAAGGTACTGATCTACCGCAACTGGCTCGGAC
TCATGAAGGGCGACCTGAGCGAATCGGTCACCAAGGGCGGCAAGACCTTCACCCGCCGCCTGAACGCCGACCGCCAGTAC
CACAAGCCCGACGGCGGCACCCTAACGCTGCACGGCCGCTCGTTGATGTTCGTGCGCAACGTCGGCCACCTGATGACCAA
CCCGGCCATCCTCGACGAGCAGGGCAATGAAGTGCCGGAAGGCATCCTCGATGCGGTGATCACCAGCCTGGCCGCCCTGC
CCGACCGCGCCAACCGGCTCAACTCGCGCACCGGCTCGATCTACATCGTCAAGCCCAAGATGCACGGACCGGCCGAGGCC
GCCTTCGCCAACGAGTTGTTCGACCGCGTCGAGGACCTGCTCAAGCTGCCGCGCCACACCATCAAGATGGGCATCATGGA
CGAAGAGCGGCGCACCAGCGTCAACCTGAAGGCCTGCATCGCGGCCGCGGCGGCGCGCGTGGCTTTCATCAACACCGGGT
TCCTGGACCGCACCGGCGACGAAATGCATACCGGCATGGAAGCCGGCCCGATGCTGCGCAAGGGCGATATGAAATCCAGC
GCCTGGATCACCGCCTACGAGCGCAACAACGTGCTGGTCGGGCTGGACTGCGGCCTGCGCGGGCGCGCCCAGATCGGCAA
GGGCATGTGGGCCATGCCCGACATGATGGCGGCCATGCTCGAACAGAAGATCGGCCACCCCAAGGCGGGCGCCAACACGG
CCTGGGTGCCCTCGCCCACGGCCGCGACCCTGCACGCCATGCACTATCACCAGGTCGACGTCGCGGCCGTGCAGCAGGCG
CTGGAGCAGACCCGCTACGACAGCGTGCGCGACGAGCTGCTGGCCGGCCTGCTGACCGTCCCGGTAGGCGATCCGGCCGC
CTGGTCGGCCGATGACATCCAGCGCGAGCTCGACAACAACGCCCAGGGCATCCTGGGCTACGTGGTGCGCTGGATCGACC
AGGGCGTGGGATGCTCGAAGGTGCCCGACATCAACAACGTCGGCCTGATGGAAGACCGCGCCACCCTGCGCATCTCCAGC
CAGCACATCGCCAACTGGCTGCGCCACGGCATCGTCGGCCGCGCACAGGTCAACGCCACGTTCGAACGCATGGCCAAGGT
CGTCGACCAGCAAAACGCCGGCGATCCCAACTACCTGCCCATGGCCGGCCACTTCGACACCTCGTTCGCCTACCGCGCGG
CGTGCGCGTTGGTCTTCGAGGGCCTGACCCAGCCCAACGGCTACACCGAGCCCCTGCTGCACGAGTACCGGCAAGCCTTC
AAGGCGGCCCAGCGCTGA

Protein sequence :
MTERIPHHGLQVAASLHRFIEDEALSGSGLAPDEFWAGFAALVRDLAPRNRELLAERDRLQGEIDAWHRAHPGPVRDSAG
YQALLERIGYLQPQPAQVTASTRDVDSEIASQAGPQLVVPVSNARYALNAANARWGSLYDALYGTDAIPPVAGDDSKGYN
PARGEAVIARARAFLDEAAPLAQGSHADATAYAIEGGKLAVTLGAGQRTGLRNPAQLAGYQGDASQPAAVLLANNGLHFE
IQIDRQHQIGATDAAGVKDVLLEAALTTIMDCEDSVAAVDADDKVLIYRNWLGLMKGDLSESVTKGGKTFTRRLNADRQY
HKPDGGTLTLHGRSLMFVRNVGHLMTNPAILDEQGNEVPEGILDAVITSLAALPDRANRLNSRTGSIYIVKPKMHGPAEA
AFANELFDRVEDLLKLPRHTIKMGIMDEERRTSVNLKACIAAAAARVAFINTGFLDRTGDEMHTGMEAGPMLRKGDMKSS
AWITAYERNNVLVGLDCGLRGRAQIGKGMWAMPDMMAAMLEQKIGHPKAGANTAWVPSPTAATLHAMHYHQVDVAAVQQA
LEQTRYDSVRDELLAGLLTVPVGDPAAWSADDIQRELDNNAQGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRISS
QHIANWLRHGIVGRAQVNATFERMAKVVDQQNAGDPNYLPMAGHFDTSFAYRAACALVFEGLTQPNGYTEPLLHEYRQAF
KAAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 64