|
Name : glcD (BN112_1577) Accession : YP_006967645.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1682795 - 1684294 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGAACACCTTGGTGGATGCCGGTTTTTCGCCCAGGCGGGAAGGCTTTGCGCCCCAGCCGCTGATCGAGGCCTTGCTGTC GATACTGCCCGCGCATTGCGTGCTGCATCGCGAAGAGGACACACGCCCGTACGAGTGCGACGGCCTGTCGCTGTACCGGG CGCTGCCGGCGGTGGTGGCCCTGCCGGAAGACGAGGCGCAGGTGCGCGCCATCATGCAGCTGTGCAAGCGCATGAACGTG CCGATCGTGGCGCGCGGCGCGGGGACCGGTCTGTCGGGCGGGGCCATGCCGCACGCGCAGGGCGTGCTGCTGGGGCTGTC CAAGCTCAACCGTATCAAGCGCATAGACCCCGCCGGCGGCACGGCCGTGGTCGAGCCGGGCGTGCGCAACCTGGCCATTT CCGAAGCCGCCGCGCCTTACGGGCTTTACTACGCCCCGGACCCATCCAGCCAGATCGCCTGTTCGATCGGCGGCAACGTG GCCGAGAACTCCGGCGGCGTACATTGCCTCAAGTACGGGCTGACGGTACACAACGTGCTGCGCGTGCGTGTGGTGACCAT CGACGGGGAGATCGTCGAGCTCGGCTCGGAAGCGCCCGATGCGCCCGGCCTGGACCTGCTGTCGGTGTTCGTCGGCTCCG AAGGCATGCTGGGCGTGGTGACCGAAATCACGGTCAAGCTGATTCCCTCGCCGGCCTGCGCGCAAGTGGTCATGGCCAGC TTCGCTAGCGTCGAAGCGGCGGGCAACGCGGTCACGCAGATCATTGCCGCAGGCCTGATCCCGGCCGGGCTGGAGATGAT GGACCGCCAGGCGGTCCACATGGTCGAGCCCTTCGTGCAGGCGGGCTACGACCTCCAGGCGCAGGCCATCCTGCTGTGCG AGGCCGACGGCACGCCGCAGGAGGTGGCCCACGAGGTCGCCATGATGGAGGCGGTATTCAAGCGGGCCGGCGCGACGCGC CTGCAGGTATCGGGCTCGGAAGCCGAGCGCCTGCGCTTCTGGGCCGGCCGCAAGAATGCCTTTCCCGCCGCCGGCCGCGT GTCGCCCGACTACTATTGCATGGACGGCACGATTCCCCGGCGCCACCTGGCGCGCGTGCTTGGCGCCATCGAGCAGATGG AAGACGATTTCGGCCTGCGCTGCGCCAACGTGTTCCATGCCGGCGATGGCAATCTGCATCCCCTGATACTGTTTGATTCG AACAAGCCCGATGAGGTCGAGCGCGCCGAGAAGTTCGGCGCCGCCATTCTCGAGCTGTGCGTGCAGGTTGGAGGCACCGT GACCGGAGAGCACGGTGTGGGTATGGAGAAAATAAATCAAATGTGCGTGCAATTCTCGCGTGACGAACTCGATGCCTTCC TGGCGGTCAAGCGGGCGTTCGACCCGCCCGGCCTGCTCAACCCTGAAAAGGTCATACCCACGCTGGCACGCTGCGCCGAA TACGGCAAGATGCACGTGCATGCCGGCGAAATGAGATTTCCCGATCTGGCGCGCTTCTAG Protein sequence : MNTLVDAGFSPRREGFAPQPLIEALLSILPAHCVLHREEDTRPYECDGLSLYRALPAVVALPEDEAQVRAIMQLCKRMNV PIVARGAGTGLSGGAMPHAQGVLLGLSKLNRIKRIDPAGGTAVVEPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNV AENSGGVHCLKYGLTVHNVLRVRVVTIDGEIVELGSEAPDAPGLDLLSVFVGSEGMLGVVTEITVKLIPSPACAQVVMAS FASVEAAGNAVTQIIAAGLIPAGLEMMDRQAVHMVEPFVQAGYDLQAQAILLCEADGTPQEVAHEVAMMEAVFKRAGATR LQVSGSEAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDDFGLRCANVFHAGDGNLHPLILFDS NKPDEVERAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSRDELDAFLAVKRAFDPPGLLNPEKVIPTLARCAE YGKMHVHAGEMRFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-142 | 60 |
