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Name : secD (BN112_2099) Accession : YP_006968161.1 Strain : Bordetella bronchiseptica 253 Genome accession: NC_019382 Putative virulence/resistance : Unknown Product : protein-export membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 2265996 - 2267876 bp Length : 1881 bp Strand : + Note : - DNA sequence : ATGAACCGCTATCCCCTCTGGAAATACATCACGGTCCTGGTTGCGGTCGTCATCGGCCTGCTCTATACCCTGCCCAACTT CTACGGCGAGTCCCCCGCCGTCCAGGTCTCGTCCGCCAAGGCGACGATCAAGGTCGACCAGGCCACGCTGGAGCAGGTCC AGCAGATCATCGAAAACGCCCAGTTGCCGGCCGACAGCGTCTACTACGAGCAGAACGGCACGCTGGGCACGGTGCGCGCG CGCTTTCCGTCCACCGACGTGCAGCTGCAGGCGCGCGACCTGATCGACCGCACGCTCAACACCGTGGCCGGCGACCCCCA TTACACCGTGGCGCTGAACCTGCTGCCCGCCTCGCCGCCCTGGATGCGGTCGCTGGGCTGGTTCGAGCCCAAGCCCATGT ACCTGGGCCTGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGCAGGGCGCCCTGACGGCGCGCTATGAC TCGCTGGTGGCCGACGTGCGCAGCGTGCTGCGCGACCAGAAGGCCGACGTCGGCGCCATCGAGCGCTCGGGCCAGTCGGT CGTGGCCACTTTCGCCACCGCCGAGCAACGCGACCGCGCCCGCGACGTGCTGCGCTCGCGCCTGCCCGACCTGCAGTTCA CCGAAACCAGCGACGGCGGCAAGCTGCAGCTGACGGGCATGCTCAATCCGGCCGCGGTCACCCGCGTGCAGGACACCGCC CTCAAGCAGAACATCAACACCCTGCACAACCGCATCAACGAGCTGGGCGTGGCCGAGCCGGTCATCCAGCAGCAAGGCGC CGACCGCATCATCGTGCAGTTGCCCGGCGTGCAGGACGTGGCCAAGGCCAAGGAGCTGCTGGGCCGCACCGCCACGCTCG AGATCCGCATGGTCGACGACAGCCCGGCGGCGCAATCGGCCCTGGCCGCGGGCAGCGTGCCGTTCGGCCTGGAGCGCTAC ACCGACCGCGACGGCCGCCCCCTGCTGGTGCGCCGCCAGGTGGTGCTGACCGGCGAGAACCTGCAGGACGCCCAGCCCGG CCGCGACGGCCAGACCCAGCAGCCAGCCGTGCACCTGACGCTGGACTCCAAGGGCGCGCGCATCTTCCGCGACGTCACGC GCGACAACGTCGGCAAGCGCATGGCCATCCTGCTGTTCGAGAACGGCAAGGGCGAAGTCGTCACCGCGCCGGTCATCCGC AGCGAAATCGGCGGCGGCCAGGTGCAGATCTCGGGCAGCATGACCGCCGAGGAAGCCGCCGACACGGCGCTGCTGCTGCG CGCCGGCGCGCTGGCCGCGCCCATGTCCATCATCGAGGAGCGCACCATCGGCCCGAGCCTGGGCGCGGACAACATCGCCA AGGGTTTCTACTCGACGCTGTATGGCTTCATCGCGATCGCCATTTTCATCATCGTGTACTACCACCTGTTCGGCATCTTC TCGACCATCGGCCTGACGGTCAACGTGCTGCTGCTGCTGGCGCTGCTGTCCATGCTGCAGGCAACCCTGACCCTGCCCGG CATCGCCGCCATCGCCCTCACCCTGGGCATGGCCATCGACGCCAACGTGCTCATCAACGAGCGCATCCGCGAAGAGCTGC GCAACGGCGCCACGCCGCAACAGGCCATCCACCATGGCTTCGAGCGCGCCTGGGGCACCATCCTGGACTCCAACCTCACC ACGCTGATCGTCGGCCTGGCGCTGCTGGCGTTCGGCTCGGGCCCGATCCGCGGCTTCGCCGTGGTGCACTGCCTGGGCAT CGTCACCTCGATGTTCTCGTCGGTGGTGGGCGTGCGCGCGCTGGCCAACCTCTGGTATGGCCGCAAGAAGAAGCTGTCGA GCATTTCCATCGGCACGGTCTGGAAACCCAAGGCAAACTGA Protein sequence : MNRYPLWKYITVLVAVVIGLLYTLPNFYGESPAVQVSSAKATIKVDQATLEQVQQIIENAQLPADSVYYEQNGTLGTVRA RFPSTDVQLQARDLIDRTLNTVAGDPHYTVALNLLPASPPWMRSLGWFEPKPMYLGLDLRGGVHFLLQVDMQGALTARYD SLVADVRSVLRDQKADVGAIERSGQSVVATFATAEQRDRARDVLRSRLPDLQFTETSDGGKLQLTGMLNPAAVTRVQDTA LKQNINTLHNRINELGVAEPVIQQQGADRIIVQLPGVQDVAKAKELLGRTATLEIRMVDDSPAAQSALAAGSVPFGLERY TDRDGRPLLVRRQVVLTGENLQDAQPGRDGQTQQPAVHLTLDSKGARIFRDVTRDNVGKRMAILLFENGKGEVVTAPVIR SEIGGGQVQISGSMTAEEAADTALLLRAGALAAPMSIIEERTIGPSLGADNIAKGFYSTLYGFIAIAIFIIVYYHLFGIF STIGLTVNVLLLLALLSMLQATLTLPGIAAIALTLGMAIDANVLINERIREELRNGATPQQAIHHGFERAWGTILDSNLT TLIVGLALLAFGSGPIRGFAVVHCLGIVTSMFSSVVGVRALANLWYGRKKKLSSISIGTVWKPKAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-92 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-92 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-92 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-92 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-91 | 42 |
