Gene Information

Name : PACID_00020 (PACID_00020)
Accession : YP_006979210.1
Strain : Propionibacterium acidipropionici ATCC 4875
Genome accession: NC_019395
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2439 - 3257 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGTACCAGCAGCCCGAGCAGCCGCCCTCACCAAGACCTATGGTCGGGGAGACACCCTGGTCGTCGCGCTGGACGC
CATCGACGTGAGTTTCGACGAAGGACGGTTCACAGCCGTGATGGGTCCCTCAGGATCCGGAAAGTCCACCCTCATGCACT
GCATGGCCGCCCTGGACCGCCCCACCTCGGGGCAGGCCTTCATCGGCGAGACCGACGTCGCCACACTCAAGGACAACGCG
CTGACCGAACTGCGCCGGGACCGGATCGGATTCATCTTCCAGTCCTTCAACCTGGTGCCCACCCTCACCGCCAGGGAGAA
CATCCTCCTCCCCCTGGCGATCGCCGGGCGCAAGCCCGACCCGGCCTGGTACGACCACGTCATCGAGACCGTCGGCCTGG
CGAACCGGCTCTCCCACAAGCCCTCGGAGCTGTCGGGAGGCCAGCAGCAGCGCGTCGCCTGCGCACGTGCCCTGGTCACC
AGGCCTCAGATCATCTTCGCCGACGAGCCCACCGGCAACCTGGACTCCACCTCATCGGCCGAGGTGCTGGAGTTCCTGCG
TTCCAGCGTCAATGACATGGGCCAGACGATCGTCATGGTCAGTCACGACCCGGTCGCCGCCTCCTACGCCGACCGCGCCC
TCTTCCTGGCCGACGGCCGGATCGTCGAGGACCTCCAGGACCCGACCCGCGACGACGTCCTGGCCACCATGGCCCATCTC
GACTCCCAGGCCCGCCGGCCCCAGCACGCCGAACCGGCCGCACCTCGACGAAGCGAGAGCTCCGGGATCAGCGGTCGCGC
CGAACCCGTGGAGCGCTGA

Protein sequence : 
MAVPAARAAALTKTYGRGDTLVVALDAIDVSFDEGRFTAVMGPSGSGKSTLMHCMAALDRPTSGQAFIGETDVATLKDNA
LTELRRDRIGFIFQSFNLVPTLTARENILLPLAIAGRKPDPAWYDHVIETVGLANRLSHKPSELSGGQQQRVACARALVT
RPQIIFADEPTGNLDSTSSAEVLEFLRSSVNDMGQTIVMVSHDPVAASYADRALFLADGRIVEDLQDPTRDDVLATMAHL
DSQARRPQHAEPAAPRRSESSGISGRAEPVER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PACID_00020 YP_006979210.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-43 48
PACID_00020 YP_006979210.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-49 46
PACID_00020 YP_006979210.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 46
PACID_00020 YP_006979210.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-41 44