Gene Information

Name : rnc (BN424_442)
Accession : YP_006991250.1
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Virulence
Product : BMC domain protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.3
Position : 487335 - 487619 bp
Length : 285 bp
Strand : +
Note : [QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGCAAACGCAAATGCATTAGGAATGATCGAAACAAAAGGTTTAGTAGCAGCGGTGGAAGCAGCAGACGCAATGGTGAA
AGCAGCAAACGTAACATTAATTGGTAAAGAACAAGTCGGTGGCGGATTAGTAACAGTTATGGTTCGTGGCGATGTTGGAG
CTGTAAAAGCAGCAACTGATGCAGGGGCTGCAGCGGCAGAACGTGTTGGACAATTATTATCAGTACACGTTATTCCACGT
CCACACTCAGAGGTAGATGCAATTTTACCAAAGGGCGCTTTATAA

Protein sequence : 
MANANALGMIETKGLVAAVEAADAMVKAANVTLIGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGQLLSVHVIPR
PHSEVDAILPKGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-08 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-08 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 8e-08 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rnc YP_006991250.1 BMC domain protein VFG1596 Protein 2e-08 63
rnc YP_006991250.1 BMC domain protein VFG1597 Protein 1e-08 63
rnc YP_006991250.1 BMC domain protein VFG1598 Protein 3e-08 58