Gene Information

Name : rnhA (HPAKL86_04270)
Accession : YP_007018920.1
Strain : Helicobacter pylori Aklavik86
Genome accession: NC_019563
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 884677 - 885141 bp
Length : 465 bp
Strand : +
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAGATTGAAATTTTTTGCGATGGCTCTTCTTTAGGCAATCCCGGGCCAGGCGGTTATGCAGCGATTTTACGCTA
TAAAGATAAAGAAAAAATCATCAGTGGAGGCGAATCATTCACCACGAATAACCGCATGGAATTAAGAGCTCTCAATGAAG
CGTTAAAAATTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATATGTGTGCCAAGCGATCAATGTGTGG
CTAACTAACTGGCAAAAAAAGAATTTTTCTAAAGTTAAAAATGTGGATTTGTGGAAAGAATTTTTAGAAGTTTCTAAAGG
GCATTTGATCATGGCTGTTTGGATCAAGGGGCATAATGGGCATGCTGAGAATGAACGATGCGATAGCCTCGCTAAATTAG
AGGCGCAAAAACGCACTAAAACGACCAAAGGGGAAAACGATGAAAAACAAACGCTCTCAAAATAG

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKIISGGESFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVW
LTNWQKKNFSKVKNVDLWKEFLEVSKGHLIMAVWIKGHNGHAENERCDSLAKLEAQKRTKTTKGENDEKQTLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-28 52