Gene Information

Name : rnhA (PputUW4_02879)
Accession : YP_007029879.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 3383684 - 3384136 bp
Length : 453 bp
Strand : -
Note : [L] COG0328 Ribonuclease HI

DNA sequence :
ATGAGCGATAGCGTAGAACTGTTCACCGACGGCGCCTGCAAGGGCAACCCCGGCCCTGGCGGCTGGGGCGCACTGCTGGT
GTGCAAGGGCGTTGAAAAGGAACTCTGGGGCGGCGAAGCCAATACCACCAACAACCGCATGGAGCTGATGGGTGCGATCC
GTGGCCTGGAAGAGCTCAAGCGTCCCTGTGAGGTGCTGCTGGTGACCGACTCCCAGTACGTGATGAAGGGCATCAACGAG
TGGATGGACAACTGGAAGAAGCGCGGCTGGAAAACCGCGGCGAAGGAGCCGGTGAAAAACGCTGATCTGTGGAAGTTGCT
CGACGAGCAGGTCAACCGCCACAAGGTCACCTGGAAATGGGTGCGCGGGCACATTGGCCATCACGGCAACGAACGCGCCG
ACCAGTTGGCCAACCGTGGCGTCGACGAAGTGCGCGGGTACAAGCAGGACTGA

Protein sequence :
MSDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMGAIRGLEELKRPCEVLLVTDSQYVMKGINE
WMDNWKKRGWKTAAKEPVKNADLWKLLDEQVNRHKVTWKWVRGHIGHHGNERADQLANRGVDEVRGYKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-37 58