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Name : tssC (PputUW4_03089) Accession : YP_007030089.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : EvpB family type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 3631174 - 3632712 bp Length : 1539 bp Strand : - Note : [S] COG3517 Uncharacterized protein conserved in bacteria DNA sequence : ATGTCTATCGAACATTCTCACGCGCAATCGCGCGGCACTACAGTGTTGCCTGAAGAAAGCCAAGGCGTGTATGGCGCGTT GTTTGGCAAGATCAATCTCAACCCGGTAAAAGTGCTGGGCGAAATTGAAGTGTTTCAAAGTTCCGAGGCGCTGTCGGACG TTTCTGCCGATGAGCGAGTGACTGCCGCTGTCAGTGTTTTCTTGAATTTGATCAAACAGTCTTCGCGCAAAGTCCGGCGT CTGGACAGGACACTGCTGGATGAACATATTGCGTCGCTGGATGCACAAATCAGCCGCCAACTGGACGCCGTGATGCATCA CCCGGATTTCCAGCGGGTGGAGTCCACCTGGCGCGGTGTGAAATCGCTGATCGATCAGACCGACTTCCGCCAGAACGTGC GCATCGAATTGCTTGATATCAGCAAGGATCACCTGGTCCAGGATTTCGAGGATGCACCGGAGATCGCACAAAGTGGCCTG TATGTGCATACCTACACCCAGGAGTACGACACCCCGGGTGGTGAGCCGATCGCCGCTGCCATTTCCAACTTCGAGTTCGA CCGCAGCCCGCAGGACATTGCCTTGCTGCGCAATATTTCCAAAGTCTCGGCAGCCGCGCACATGCCCTTCATTGGCTCCG TCGGCCCGGCCTTTTTTGGCAAGCACTCGATGGAAGAAGTCGCCGCCATCAAGGACATCGGCAACTACTTTGATCGTGCC GAATACATCAAGTGGAAAGCGTTCCGCGACAGCGACGATGCCCGCTATATCGGCTTGCTCATGCCCCGCGTGCTGGGCCG TCTGCCGTATGGCCCGGACACCGTTCCGGTGCGCAGCTTCAACTACATCGAAAGCGTCAAGGGACCGGACCACGACAAAT ACCTGTGGACCAACGCCTCGTTTGCCTTCGCTGCCAACATGGTCAAGAGCTTTATCGCCAACGGCTGGTGCGTGCAGATC CGCGGTCCGCAGTCTGGCGGCGCGGTCACCGACTTGCCGATCCACTTGTATGATCTGGGCACTGGCAATCAGGTGAAGAT CCCTTCGGAAGTGATGATTGCGGAGACGCGCGAGTTCGAGTTCGCCAACCTCGGTTTCATCCCGCTCTCGTACTACAAGA ACCGTGACTATGCGTGCTTCTTCTCGGCCAACTCCACGCAGAAACCGGCGCTATACGATACCCCTGAGGCCACCGCCAAT AGCCGGATCAATGCGCGCCTGCCCTACATCTTCCTGCTGTCACGCATTGCCCATTACCTGAAGCTGATCCAGCGCGAAAA CATCGGCACCACCAAGGATCGCCGATTGCTGGAGCTGGAGCTGAACAAGTGGGTCAGCGGGCTGGTCACCGAGATGAACG ATCCGGGCGACTCGCTGCAGGCTTCGCACCCGTTGCGGGCTGGCCGGGTCACCGTCGAAGACATCGAGGACAACCCGGGT TTCTTCCGCGTCAAGTTGTACGCCGTGCCGCATTTCCAGGTGGAAGGCATGGACGTCAACCTGTCGCTGGTTTCGCAGAT GCCCAAGGCAAAAGCCTGA Protein sequence : MSIEHSHAQSRGTTVLPEESQGVYGALFGKINLNPVKVLGEIEVFQSSEALSDVSADERVTAAVSVFLNLIKQSSRKVRR LDRTLLDEHIASLDAQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIAQSGL YVHTYTQEYDTPGGEPIAAAISNFEFDRSPQDIALLRNISKVSAAAHMPFIGSVGPAFFGKHSMEEVAAIKDIGNYFDRA EYIKWKAFRDSDDARYIGLLMPRVLGRLPYGPDTVPVRSFNYIESVKGPDHDKYLWTNASFAFAANMVKSFIANGWCVQI RGPQSGGAVTDLPIHLYDLGTGNQVKIPSEVMIAETREFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYDTPEATAN SRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNKWVSGLVTEMNDPGDSLQASHPLRAGRVTVEDIEDNPG FFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-100 | 45 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-100 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssC | YP_007030089.1 | EvpB family type VI secretion protein | VFG2475 | Protein | 1e-110 | 47 |
| tssC | YP_007030089.1 | EvpB family type VI secretion protein | VFG2093 | Protein | 1e-107 | 44 |
| tssC | YP_007030089.1 | EvpB family type VI secretion protein | VFG2070 | Protein | 1e-87 | 42 |
