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Name : ccmF (PputUW4_03835) Accession : YP_007030832.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 4431166 - 4433154 bp Length : 1989 bp Strand : - Note : [O] COG1138 Cytochrome c biogenesis factor DNA sequence : ATGACATCCGGCATCTTTATTCCCGAGCTTGGCCATCTGGCGATGATCCTGGCCCTGTGCTTCGCCCTGGCCCAGGCCGT GGTGCCGCTGTTCGGTGCCTGGCGCGGTGACCGCCTGTGGATGAGCCTGGCCCAGCCGGCCGCCTGGGGGCAGTTCAGCT TTCTGCTGTTTGCCTTCGGTTGCCTGACCTACGCCTTCATGGTCGATGACTTCTCCGTGGCCTATGTGGCCAACAACTCC AACAGCGCCTTGCCGTGGTACTACAAGTTCAGTGCGGTGTGGGGTGCCCACGAGGGTTCCTTGCTGTTGTGGGCCTTGAT TCTCGGTGGCTGGACCTTCGCGGTGTCGGTGTTCTCCCGGCAGTTGCCACAGGTCATGCTGGCCCGTGTGCTGGCGGTGA TGGGCATGATCAGCACCGGTTTCCTGATGTTCCTGATCATGACCTCCAACCCGTTCAAACGCATCCTGCCGCAAATGCCC AGCGACGGTGCCGACCTCAACCCCTTGCTGCAAGACATCGGCCTGATCGTGCACCCGCCAATGCTGTACATGGGCTACGT CGGGTTCTCGGTGGCCTTCGCCTTCGCCATCGCCGCGCTGATGGGCGGTCGCCTGGATGCCGCGTGGGCGCGCTGGTCGC GTCCGTGGACCATCGTGGCCTGGGCGTTCCTCGGCATCGGCATCACCCTCGGTTCGTGGTGGGCGTACTACGAACTTGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCTTCCTTCATGCCATGGCTGGTGGGTACCGCGCTGATTCACTC GCTGGCGGTCACGGAAAAACGTGGCGTGTTCAAGAGCTGGACCGTGTTGCTGGCCATCGCTGCGTTCTCGTTGAGCCTGC TGGGCACTTTCCTTGTGCGCTCCGGGGTGCTGACGTCGGTTCACGCCTTTGCCTCCGATCCGGAACGCGGCGTGTTCATC CTGATTTTCCTGCTGTTCGTGGTTGGCGGTTCATTGACGCTGTTCGCCCTGCGCGCGCCGGTGGTCAAGAGCCAGGTCGG CTTCAACCTCTGGTCCCGGGAAACCCTGCTGCTGGGCAACAACCTGGTGCTGGTGGTGGCCGCCTCGATGATTCTGCTGG GCACCTTGTACCCACTGATTCTCGATGCCATGACTGGCGCCAAGCTGTCGGTTGGCCCGCCGTACTTCAACGCGCTGTTC ATTCCGTTGATGGCGTTGTTGATGGTGGTGATGGCGGTCGGCGTGATCGTGCGCTGGAAAGACACCCCGGTGAAATGGCT GCTGAGCATGCTGACGCCGGTATTGCTCGGCAGTGCGGCCATGGCCGTGGTGGCTGGCGTCGCGTACGGGGACTTCAACT GGGCAGTGCTCGCGACCTTCATGCTTGCCGCTTGGGTGCTGTTGGCCGGTGCGCGTGACATTGTCGACAAGACCCGCCAC AAAGGCCTGATCAAAGGCCTGCCCACCCTGACCCGCAGCTACTGGGGCATGCAGATCGCACACCTTGGTATTGCCGTGTG TGCGCTGGGTGTCGTGCTGTCGAGCCAGAACAGTGCCGAGCGCGACCTGCGCCTGGCGCCGGGCGAGTCCATGGACCTGG CCGGTTATCACTTCATCTTCGAAGGCGCCAAGCACTTCGAAGGCCCGAACTTCACGTCCGACAAGGGCACCGTCCGGGTG ATCCGCAACGGCAAGGAAATCAGCGTGCTGCACCCGGAAAAACGCCTGTACACCGTGCAGAACTCGGTGATGACCGAAGC CGGCATCGACGCCGGTTTCACCCGCGACCTCTATGTCGCCCTCGGTGAACCGCTGGGTAACGGCGCCTGGGCTGTGCGCG TGCACGTCAAACCCTTCGTGCGCTGGATCTGGTTCGGTGGTTTGCTGACAGGTGCAGGTGGTTTGCTGGCGGCGCTGGAT CGGCGTTATCGGGTCAAGGTAAAAAGCCGCGTGCGTGAAGCACTGGGCATGTCGGGAGCCACTGCATGA Protein sequence : MTSGIFIPELGHLAMILALCFALAQAVVPLFGAWRGDRLWMSLAQPAAWGQFSFLLFAFGCLTYAFMVDDFSVAYVANNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLMFLIMTSNPFKRILPQMP SDGADLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALMGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLILDAMTGAKLSVGPPYFNALF IPLMALLMVVMAVGVIVRWKDTPVKWLLSMLTPVLLGSAAMAVVAGVAYGDFNWAVLATFMLAAWVLLAGARDIVDKTRH KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYHFIFEGAKHFEGPNFTSDKGTVRV IRNGKEISVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGEPLGNGAWAVRVHVKPFVRWIWFGGLLTGAGGLLAALD RRYRVKVKSRVREALGMSGATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-140 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-128 | 55 |
