Gene Information

Name : fecI5 (PputUW4_04994)
Accession : YP_007031989.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5703245 - 5703763 bp
Length : 519 bp
Strand : +
Note : [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

GTGTCGTCAGTCCCAAGCCCTCAAAGTGAACTCGTCGGTGCGTTGTATCGCGACCATCGCGGTTGGCTATTGGCCTGGCT
TCGACGCAATGTCGCCTGCCCACAGCGGGCCGAAGACCTGAGCCAGGACACGTTCGTGCGTTTGCTGGGCCGCGAGGAAC
TGAAGGAACCACGCGAACCCCGGGCATTCCTGGTGGCCATCGCCAAGGGCCTGCTGTTCGATTATTTCCGTCGCGCCGCG
CTGGAGCAGGCTTACCTCACCGAACTGATGCTGATTCCCGAAGCCGAACAACCGTCGGCGCAAGAGCAGCAGATGATCCT
CGAAGACCTGAAAAACATCGACCGTTTGCTCGGCAAGCTTTCCACCAAGGCCCGGGCTGCGTTCCTCTACAACCGTCTCG
ACGGTCTTGGCCACGCAGAAATCGCCGAGCGCCTGGGGGTATCGGTGCCGCGGGTACGCCAGTACCTGGCCCAGGGCATT
CGCCAGTGCTATATCGCGCTATATGGTGAGCCGACATGA

Protein sequence :

MSSVPSPQSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGREELKEPREPRAFLVAIAKGLLFDYFRRAA
LEQAYLTELMLIPEAEQPSAQEQQMILEDLKNIDRLLGKLSTKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGI
RQCYIALYGEPT

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	5e-29	44

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI5	YP_007031989.1	RNA polymerase sigma factor	VFG1049	Protein	2e-29	44