Gene Information

Name : PputUW4_00881 (PputUW4_00881)
Accession : YP_007027893.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.13.3
Position : 1041687 - 1043207 bp
Length : 1521 bp
Strand : -
Note : [T] COG0642 Signal transduction histidine kinase

DNA sequence :
ATGAGGCTGACCCTGACGCAACGCCTGTCCCTGGTGTTCGCCGTGCTGCTGCTGGTGTGCTGCGGCACGTCGGCGTGGAT
GCAGGTTCGCTCCAACCAGATGCATGAACAGGAAGTGGTGCAAGGCTTGTCCCGGGACCTGGCGCAGCACATCGCCAGCG
ACACGGTGCTGATGGACACCCAGGGCCTGATGCCCAATGCCGTGCGTGATTTGTTCAGCAAGCTGATGCAGGTCAACCCC
AGTGTCGAGGTGTACCTGCTCGACACCGAGGGCAAGATTGTCGGCAGTGCCGCGCCCGAGGGCCGGATCCGTCGGGAGCG
GGTCGACCTCGCGCCGATCCAGCGCCTGCTGCGGGGCGATCCGCTGCCGATTCCCGGCGACGACCCGCGCAGTGTCGATG
CGCGCAAGGTGTTCAGCGCAGCACCGCTGAAGGTGGATGGCAAGCCGGTGGGCTATCTCTACGTGGTGCTGCTCGGTGAG
GATCACGACCGCCTGGCCGAACGCGGTGCAACCAGCGCGGCGCTCAACACAGCGCTGCTGTCCATCGGCCTGGTGGCATT
GCTGTGCCTGATTGCCGGCCTCACCGCGTTTGCCCTGATCACCCGGCCGTTGCGCCGCTTGACCGAAACCGTCAGCCAGT
TCGACATCGATGGCGTACCGGTCACACCGGCCCTGCCCGTCGCGATGGAAAAAGCCGCCAGCCACGATGAAATCGCCGTG
CTCGATGCCACGTTCCGGCAGATGCAGGCCCGCCTGGGCGAGCAATGGCGTTCGTTGACCCGCCAGGACCAGGAGCGCCG
CGAACTGGTGGCGAACATCTCCCACGACTTGCGCACGCCGCTGGCCTCGCTGCACGGCTATCTGGAAACCCTGTCGCTCA
AGGACGCCACGCTGTCCCCTGCCGACCGCCGTCGCTACCTCGGCATCGCACTGGACCAGAGCCGCAAGGTCGGTGGTCTG
GCGCAGTCGTTGCTGGAACTGGTGCGGCTGGAACACGGCTTCGTGCAGCCGGTGCTGGAGCGTTTTTCCCTGACCGACCT
GGCCCAGGACATCTTCCAGAAATTCGAACTCACCGCCGAAGCGCGCCAGGTCGAACTCAAGGCCGCGTTCGCGCCAAACA
CCTCGGCGGCCTGCGCGGATCTCGGGTTGATCGAACGGGTGCTGACCAACCTGTTCGACAATGCCCTGCGCCATACACCG
CCAGGTGGAGACGTCGAACTGGGCCTGCGCCCGCAAGGGGCATTCATCGAAGTCACGGTCAGCGACACCGGCCCGGGCAT
TGCCCCGCAATTGCGCGAAGGTTTGTTCCTGCGTCCGTTCAACATCGGCGGCGCACGGCGCGATGGGGGGTTGGGGCTGC
GGATCGTGCATCGCATCCTGCAATTGCACGGGCGCGATATTCAGCTGATCGATGTACCGGGACGGGGGGCGACCTTTCGG
TTTTCGTTGCCGATCGATGAAGAGACAGCGTTGGCGTTGGCGGTGCGGTCGATGAACCTGAATACGCCGCGGCAGGCCTG
A

Protein sequence :
MRLTLTQRLSLVFAVLLLVCCGTSAWMQVRSNQMHEQEVVQGLSRDLAQHIASDTVLMDTQGLMPNAVRDLFSKLMQVNP
SVEVYLLDTEGKIVGSAAPEGRIRRERVDLAPIQRLLRGDPLPIPGDDPRSVDARKVFSAAPLKVDGKPVGYLYVVLLGE
DHDRLAERGATSAALNTALLSIGLVALLCLIAGLTAFALITRPLRRLTETVSQFDIDGVPVTPALPVAMEKAASHDEIAV
LDATFRQMQARLGEQWRSLTRQDQERRELVANISHDLRTPLASLHGYLETLSLKDATLSPADRRRYLGIALDQSRKVGGL
AQSLLELVRLEHGFVQPVLERFSLTDLAQDIFQKFELTAEARQVELKAAFAPNTSAACADLGLIERVLTNLFDNALRHTP
PGGDVELGLRPQGAFIEVTVSDTGPGIAPQLREGLFLRPFNIGGARRDGGLGLRIVHRILQLHGRDIQLIDVPGRGATFR
FSLPIDEETALALAVRSMNLNTPRQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-88 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_00881 YP_007027893.1 histidine kinase VFG1701 Protein 9e-89 43