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Name : secD (PputUW4_00920) Accession : YP_007027932.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1091414 - 1093282 bp Length : 1869 bp Strand : + Note : [U] COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTGAACAAATATCCTCTGTGGAAATACATTCTGATCCTGGCGGTGCTGGCGGTCGGTCTGATTTATTCCGCTCCCAA TCTTTATCCTGATGACCCGGCCATTCAGGTCAGTGGTGCAAGCACTGCGCTGCAGGTCAATCAGGCTGATCTGGATCGTG TGAGCGCTGCGCTCAAGGAATCCGGGATCAACGTCAAGGCTGCCACGCTGGCAGAGGGCGGCAAGGGTGGTCTGATTCGC CTGACCAAGGCTGAAGACCAGTTGCCGGCCAAGGACGTTGTACGCAAGGCGTTGGGTGATGACTACGTCGTTGCATTGAA CCTGGCGCAAACCACCCCGCAATGGCTGCGCAACCTCGCTGCGCACCCGATGAAGCTGGGTCTGGACTTGTCTGGTGGTG TGCACTTCCTGCTGGAAGTGGACATGGACAAAGCCCTCGATGCACGCCTGAAAGTCTACGAAGGCGACGTCAAGAGCCTG CTGCGTAAAGAAAAGCTGCGCTATCGCAGCCTGCCGCAACTCAATGGTGCCATCCAGCTGGGCTTCGCTGATGAAGACAG TCGTGAACAGGCCCGTGTGCTGATCCGCAAGAACTTCAACGATTTCGACATTGTTCCGGCCGACCTCAATGGTCAACCGG TGCTGCGTCTGGCGATGACCCCGGCCAAGCTGGCGGAAATCCGCGAATACTCCATCAAGCAGAACTTGACCACGGTACGT AACCGCGTCAACGAGCTGGGTGTTGCCGAACCGATCGTCCAGCGCCAGGGCGCCAACCGCATCGTGGTTGAGCTGCCGGG TGTGCAGGACACCGCCGAAGCCAAGCGTATTCTCGGCAAGACGGCCAACCTCGAGTTCCGTCTGGCGGCAGAGCCGGGTG CTTCGAAAGCCACTTCCGAATCCTTCGAGTTCCGTGAAGGCGGCCGTCCTCCAGCGCTGATCGAGCGCGGCCTGATCATC ACCGGCGACCAGGTGACTGACGCCAAGGCCGGCTTCGACGAGCACGGCAGGCCAGAAGTGAATATCCGTCTGGATGGCCA CGGCGGCGAGCTGATGAACCGTGCGACCCGTTCGAACGTCGGTCGCAGCATGGCGGTGATCTTCATCGAGCAGCGTCCGG TTACCACGTATACCAAGCAAGTGGTCAACGGCGTCGAGAAAGACGTGCCGGTTCAGAGCTTCAAGGAAGAGAAGAAGATC ATCAGCCTGGCGACCATCCAGTCGCCGCTGGGTGCCCAGTTCCGTATTACCGGCCTGAACGGCCAGGGCGAGTCGTCCGA GCTGGCGCTGCTGCTGCGTGCCGGTGGTCTGGCTGCACCGATGTACTTTGCTGAAGAGCGCACCATTGGTCCAAGCCTGG GTGCCGACAACATCACCAAGGGTATCGATGCGTCGCTGTGGGGCATGCTGTTCGTCTCGCTGTTCATCATGGCCATCTAC CGCTTCTTCGGCCTCATCGCCACCGTCGCTCTGGCGGTGAACATGGTGATGCTGCTGGCGCTGATGTCGCTGCTGGGTGC AACGCTGACCCTGCCGGGCATCGCCGGTATCGTATTGACCATGGGTATGGCGGTCGACGCCAACGTGCTGATCTTCTCGC GGATCCGTGAAGAGATCGCCGCCGGCATGACCGTGCAGCGTGCAATCAACGAAGGCTTCGGCCGGGCATTCACCGCGATT CTCGACGCCAACCTGACCACCTTGCTGGTCGGCGGCATCCTCTTTGCCATGGGCACCGGCCCGGTCAAGGGCTTCGCAGT GACCATGTCCCTCGGGATCTTTACCTCGATGTTCACGGCCATCATGGTGACCCGCGCGATGGTCAACCTGATCTTCGGCG GTCGTGACTTCAAGAAGTTGTGGATTTAA Protein sequence : MLNKYPLWKYILILAVLAVGLIYSAPNLYPDDPAIQVSGASTALQVNQADLDRVSAALKESGINVKAATLAEGGKGGLIR LTKAEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLAAHPMKLGLDLSGGVHFLLEVDMDKALDARLKVYEGDVKSL LRKEKLRYRSLPQLNGAIQLGFADEDSREQARVLIRKNFNDFDIVPADLNGQPVLRLAMTPAKLAEIREYSIKQNLTTVR NRVNELGVAEPIVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPGASKATSESFEFREGGRPPALIERGLII TGDQVTDAKAGFDEHGRPEVNIRLDGHGGELMNRATRSNVGRSMAVIFIEQRPVTTYTKQVVNGVEKDVPVQSFKEEKKI ISLATIQSPLGAQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIMAIY RFFGLIATVALAVNMVMLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMTVQRAINEGFGRAFTAI LDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAIMVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 89 |
