Gene Information

Name : Nos7107_5410 (Nos7107_5410)
Accession : YP_007053043.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Virulence
Product : cyclic nucleotide-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.43
Position : 6287507 - 6290212 bp
Length : 2706 bp
Strand : -
Note : TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR010132:IPR005074:IPR001140:IPR 003439; KEGG: ana:alr1614 tox

DNA sequence :
ATGGCTAGCAGAGAAAATTCAAAAGCTAACAGTGAAATTACAAATGGGTTAACACCACTGGATCATGAATCTTTAGAAAT
TAACGCTATAGCAGAAATACCGTGGAATCAAGGGCCATTATGTTGGCTAAGTAGCGAACAACAAGCGAGATTGCGTTATC
AGGTAATTATCCATCGCTACCAACTAGGAGAAAAAATCTGGTCAACGCAAAAACGCGGCTACCAATACTACATCGTCTCA
GGCAAAGTCAGACTGAGACAAGAACAAGATAGTCTTGCCCTAGCAGCCTTGCAAACTGGCGACTGGTTTGGCGACCTTTA
CACAATAGCTGTAGACTGCAAAGCCGTAGCCGCCAGTAAAGAAGTCATCGTCGCCTGTTGGGACAGCGCCCTGTGGAAAG
AATTTAGCACTCCCGAAATTGCACAATTTTTCTCTGGTTCCACCACAGAACCACCACAAATTAATACTCAAAACCAACCC
AGCCTAGAAGCACAACTGCCTCTACCAGCCGCCACAGTTAGCCCTCCAGAAACTCAGCAGCCAACTCTACAAGAATTACT
CAACCGCACTCCAGATACCTCAAATTATCCCTTTATTGCCCACAGCAACACGGCTGCCGCCTGTCTGACAATGGTGGCGC
AACAACTAGACAACCCTGTTCAACTCGAATGGGTACAACGGCAACTGCGGGGACAAAACTCGAAACATATTGTCGAAGGT
GCCGAGAAACTTGGACTAGTATTGCGGCGACTCCAAGTTAGTTGGGACGAATTACCCAAACTTTCGTTTCCAGCCCTGAT
GTTGTGGCGTAGCGAAACTCAACCCCAGTCCAGTTGGGTAGTTGTTTATGCCGTCAAAGGTTCACGCTTAATTATTGCCA
ACCCCCTAAATTTAGGGCAAATATGTGAGACTCTACCCCAATCAATTGTCGAAGCTGCTTGGGATGGGCAACTTTGGCAA
GTAGAACTGATTAACAAACAAGAAAAATTTAACCTCAGTTGGTTTGTTCCGGCTGTTTGGAAATATAAGGGATTATTAGG
GGAAGTTCTGCTGGCATCCTTCACATTACAACTATTTGGCTTAGGCACACCCCTCATTACCCAGGTCGTGATCGATAAGG
TGATGGTGCAAGAAAGTTTGCCTACCCTGGATGTGATGGCGATCGCTTTATTGTTAATTGCTTGTTTTGAGGCGGTGCTT
GGCACTTTGCGCCTTTTCATCTTTACCCATACTGCGAGACGATTGGATTTAAGTTTATCGGCACAGCTATTTCGTCATCT
CATGCGCTTGCCTTTAGCTTATTTTGAGTCTCGGCGGGTGGGTGATACTGTCGCCCGTGTCCAAGAACTGGAACAAATCC
GGCAATTTCTCACAGGTACAGCTTTAACGGTCATTCTTGACAGCATATTCGCTGTTGTCTATTTGGTGTTGATGTTTTAC
TACAACATCCCTTTAACTTTTGTTGCCTTGGCGGTGTTGCCATTGTTTGCCGCTTTAACGATTTTTGCTACACCAATCTT
ACGCAACTGGCTCAACGAAACGTTTAATCGCAGTGCCGACAGTCAATCATTTTTGGTAGAAACAATTACAGGTATTCATT
CTGTAAAAGCTCATGCGGCTGAACCCGTAGCGCGGGAACGTTGGGAAGGTTTGTTTGCCCGATTTATCCGTACCAGTTTC
AAAGCCTCAACGACATCTAATATTAGTAGTAATATTGGTGACTTTCTTACTAATTTTTCTACCTTACTAATTCTCTGGGT
GGGTGCAAAGCTAGTGATTGGTCAACAACTTACCATTGGTCAGTTAGTTGCTTTTCAGATGTTATCTGGGAGAGTGACAG
AACCACTGTTGCGTTTGGTGCAACTCTGGCAAAATCTGCAACAAGTATTGCTATCAGTAGATAGAATTGGTGATATTCTC
AACACTGCCCCAGAAGCGGAACCAGGTACAGGATTGGTCTTACCAACATTAAAAGGGCAAGTAAATTTTGAACAGGTATT
TTTCCGTTATCAAGCCCATACTGAACCTGTGTTACGTGGGATCACTTTTGATGTACAACCAGGACAGTTTGTGGGGATAG
TCGGACGTAGTGGTTCGGGCAAAAGTACACTGTCAAAGTTATTGCAACGGTTATATCAAATTGAATCGGGACGCATCTTA
ATTGATGGGTTTGATATTAAAAGCGCAGATTTAGCATCGCTGCGGCAACAAATTGGGGTGGTGTTACAAGAGGACTTTTT
GTTTAATGGTTCAATTTTAGAAAATATTACTTTGGGTAATCCCAATATTACGGCTGAACAGGTAGTAGAAGCTGCAAGAT
TAGCTGTAGCCCACGATTTTATTAGTCAATTAGCATTTGGTTACGAGACAAATGTCGGTGAGCGAGGTACGGCTTTGTCT
GGAGGACAGCGACAACGTATTGCTTTGGCACGGTTGTTTTTGTCTGATTCTCCAATTTTAATTTTGGATGAGGCGACGAG
TGCCTTAGATAGCGAAACAGAACAACAAGTACTCCAAAACTTACAACGAGTTTCGGCAAATCGCACAGTGTTTCTGATTG
CTCACCGCTTTGCACCACTCAAGCGGGCTGATTTAATTGTAGTAATGGAGAAAGGCGTAATTGCTGAACGTGGTACTCAC
ACTCAACTTTTACAGCAGAAGGGTTTGTATTGGTCTCTTTATCAGCGTCAACAGGCTAATGTGTAG

Protein sequence :
MASRENSKANSEITNGLTPLDHESLEINAIAEIPWNQGPLCWLSSEQQARLRYQVIIHRYQLGEKIWSTQKRGYQYYIVS
GKVRLRQEQDSLALAALQTGDWFGDLYTIAVDCKAVAASKEVIVACWDSALWKEFSTPEIAQFFSGSTTEPPQINTQNQP
SLEAQLPLPAATVSPPETQQPTLQELLNRTPDTSNYPFIAHSNTAAACLTMVAQQLDNPVQLEWVQRQLRGQNSKHIVEG
AEKLGLVLRRLQVSWDELPKLSFPALMLWRSETQPQSSWVVVYAVKGSRLIIANPLNLGQICETLPQSIVEAAWDGQLWQ
VELINKQEKFNLSWFVPAVWKYKGLLGEVLLASFTLQLFGLGTPLITQVVIDKVMVQESLPTLDVMAIALLLIACFEAVL
GTLRLFIFTHTARRLDLSLSAQLFRHLMRLPLAYFESRRVGDTVARVQELEQIRQFLTGTALTVILDSIFAVVYLVLMFY
YNIPLTFVALAVLPLFAALTIFATPILRNWLNETFNRSADSQSFLVETITGIHSVKAHAAEPVARERWEGLFARFIRTSF
KASTTSNISSNIGDFLTNFSTLLILWVGAKLVIGQQLTIGQLVAFQMLSGRVTEPLLRLVQLWQNLQQVLLSVDRIGDIL
NTAPEAEPGTGLVLPTLKGQVNFEQVFFRYQAHTEPVLRGITFDVQPGQFVGIVGRSGSGKSTLSKLLQRLYQIESGRIL
IDGFDIKSADLASLRQQIGVVLQEDFLFNGSILENITLGNPNITAEQVVEAARLAVAHDFISQLAFGYETNVGERGTALS
GGQRQRIALARLFLSDSPILILDEATSALDSETEQQVLQNLQRVSANRTVFLIAHRFAPLKRADLIVVMEKGVIAERGTH
TQLLQQKGLYWSLYQRQQANV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 7e-122 45
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 5e-122 45
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 5e-122 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_5410 YP_007053043.1 cyclic nucleotide-binding protein VFG0841 Protein 3e-114 45
Nos7107_5410 YP_007053043.1 cyclic nucleotide-binding protein VFG1557 Protein 3e-122 45
Nos7107_5410 YP_007053043.1 cyclic nucleotide-binding protein VFG1501 Protein 3e-122 45
Nos7107_5410 YP_007053043.1 cyclic nucleotide-binding protein VFG0907 Protein 3e-122 45
Nos7107_5410 YP_007053043.1 cyclic nucleotide-binding protein VFG1269 Protein 3e-123 44