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Name : Riv7116_1560 (Riv7116_1560) Accession : YP_007054667.1 Strain : Rivularia sp. PCC 7116 Genome accession: NC_019678 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1956693 - 1959359 bp Length : 2667 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB DNA sequence : ATGCAGCCTACAGATCCAGATAAATTTACTGATAAAGCCTGGGAAGCAATTGTTAAATCTCAGGATATTGTCCGTGCTTA CAATCAACAGCAGTTAGATGTAGAACATTTGATGCTGGCTCTTTTGGAACAAGATAATGGGTTGGCGAATAAAGTTCTCA GTCGTTCTGGTGTGGAAATTGAGCGATTGCAACAACAGCTTGAAGATTTTACCCGCCGTCAACCGAAAGTAGGCAGAAGC GAGCAATTATACCTGGGTAAAGGTCTTGACCGGATGCTTGATGGTGCTGAAGATGCTAGGTTGAGTATGAATGATGCTTA CATTAGTGTGGAACATCTTCTACTAGCTTTTGCTGAAGAAGAGCGTATTGGCAGAAAAATATTTAGAAGTTTAAATGCTA GTATCGATGATTTAGAAGATGCGATTAAAGGAGTGCGCGGTAGTCAGAAAGTAACTGACCAAAATCCCGAATCTCGTTAT GAAGCATTAGAAAAGTTTGGTAGAGATTTAACCGAACAAGCAAAAGCGGGTAAACTTGACCCCGTGATTGGACGAGATGA AGAAATTCGTCGCGTGATTCAAGTCTTATCTCGTCGAAGTAAAAATAATCCGGTGTTAATTGGCGAACCTGGAGTGGGAA AAACTGCGATCGCTGAAGCGTTGGCTCAAAGAATTATTAATGGGGATGTCCCAGAATCGCTGAAGAACCGGCAAATCATC GGTTTGGATATGGGTAGTTTGATTGCTGGCGCAAAATATCGCGGTGAGTTTGAAGATAGACTAAAAGCTGTTCTCAGGGA AGTTACTGAGTCTGCCGGTCAAATTGTTTTATTTATTGATGAATTACATACGGTAGTTGGTGCCGGTTCCGGACAGCAAG GTTCAATGGATGCCGGTAATTTACTCAAGCCGATGTTAGCGCGGGGTGAATTGCGCTGTATTGGTGCTACAACCTTGGAT GAGTATAGGAAGTATATCGAAAAAGACCCGGCTTTAGAAAGACGTTTTCAACAGGTTTTAGTTACTCAACCCAGCGTAGA AAATACGATTTCTATTTTGCGGGGACTTAAAGAGCGTTATGAAGTCCACCATAATGTCAAAATTTCTGACTCTGCTTTAG TTGCAGCCGCAACAATGTCAGCACGTTACATTTCCGACCGTTTTTTACCCGATAAAGCCATTGATTTGGTAGATGAAGCA GCAGCGCAGTTAAAAATGGAAATTACTTCCAAACCTGCGGAATTAGAAAATATTGAGCGTCGTTTGATGCAACTCGAAAT GGAAAAGCTGTCTTTAGCAGGAGAAGAAAAAGCGACATTTCAGACGCAGCAGCGCTTAGAGCGAATTGAGCAAGAAATTG ATGATTTGACGGAAAAGCAGGAAGATTTTAACGCTCAGTGGCAAGGTGAAAAACAAGTTTTAGAAGATATTAGTGGTTTA AAACAGGAAGAAGAGAAACTTAGAGTCCAAATTGAACAAGCCGAGCGTGCTTACGATTTAAACACCGCAGCCCAATTAAA GTACGGGAAATTAGAAGGAGTACAGCGCGATCGCGAAATTAAGGAAACAAAATTATTAGAAATTCAAAGCAAAGGCGTAA GTTTATTAAGAGAGCAGGTTACGGAAGACGATATTGCTGAAATAGTCGCAAAATGGACGGGAATTCCAGTAAATAGCCTG TTAGAGTCAGAAAGACAAAAATTGTTGCAGCTCGAAGATCATCTTCATCAACGAGTCATCGGACAAGATGAAGCAGTATC AGCAGTATCAGCTGCAATCCGTCGCGCTCGGGCGGGAATGAAAGACCCCCAGCGTCCAATTGGTTCGTTTTTATTCATGG GACCTACGGGTGTTGGAAAAACAGAATTAGCTCGTGCGTTAGCGAAATTTATGTTTGATTCCGAAGACGCAATGGTGCGT TTAGATATGTCGGAATACATGGAAAAGCATTCTGTATCTCGCTTAGTGGGAGCGCCTCCTGGATACGTTGGCTTTGAAGA AGGAGGTCAACTTTCCGAAGCAGTTCGTCGTCGTCCTTATTCTGTGGTGCTGCTTGACGAAGTTGAAAAAGCCCACGCCG ACGTATTTAATATTTTATTGCAAGTCTTAGATGACGGCAGAATTACTGATTCTCAGGGAAGAGTCGTAGACTTTCGCAAT ACCGTGATCGTGATGACGAGTAATATTGGTAGCGAGCATATATTAGATATATCTGGCGATGATTCGCAGTATGAAAAAAT GCGGAATCGAGTCATGGGAGCCTTGCGAAAACACTTCCGCCCAGAATTTGTCCAACGTATTGATGATTTAATTATCTTCC ATGCTTTGGGTAGAAAACAAATGGGAGATATTGCTCGGATTCAGCTAAAACGAGTAGAAGGTTTATTAGCAGATCAAAAA ATCTCCGTCGAAATTACCCCAGCAGCTTGCGAGAAACTAGTAGAAATTGGTTACGATCCCATGTATGGTGCGCGTCCAAT CAAGCGAGCAATTCAGCGAGAAATAGAAAACCCCCTTGCCACAAAGATTCTAGAAAATACCTTTGTACCGGGTGACACAA TCATAATTGATAGAGATCCCAATGGTTTAACCTTCAGCAAAAAAGCCGTTGTCAAAGTATCTTCTTCTGCAAATACCGTA CAAGTTATAGAGTCTGCGGAAGGGTGA Protein sequence : MQPTDPDKFTDKAWEAIVKSQDIVRAYNQQQLDVEHLMLALLEQDNGLANKVLSRSGVEIERLQQQLEDFTRRQPKVGRS EQLYLGKGLDRMLDGAEDARLSMNDAYISVEHLLLAFAEEERIGRKIFRSLNASIDDLEDAIKGVRGSQKVTDQNPESRY EALEKFGRDLTEQAKAGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRIINGDVPESLKNRQII GLDMGSLIAGAKYRGEFEDRLKAVLREVTESAGQIVLFIDELHTVVGAGSGQQGSMDAGNLLKPMLARGELRCIGATTLD EYRKYIEKDPALERRFQQVLVTQPSVENTISILRGLKERYEVHHNVKISDSALVAAATMSARYISDRFLPDKAIDLVDEA AAQLKMEITSKPAELENIERRLMQLEMEKLSLAGEEKATFQTQQRLERIEQEIDDLTEKQEDFNAQWQGEKQVLEDISGL KQEEEKLRVQIEQAERAYDLNTAAQLKYGKLEGVQRDREIKETKLLEIQSKGVSLLREQVTEDDIAEIVAKWTGIPVNSL LESERQKLLQLEDHLHQRVIGQDEAVSAVSAAIRRARAGMKDPQRPIGSFLFMGPTGVGKTELARALAKFMFDSEDAMVR LDMSEYMEKHSVSRLVGAPPGYVGFEEGGQLSEAVRRRPYSVVLLDEVEKAHADVFNILLQVLDDGRITDSQGRVVDFRN TVIVMTSNIGSEHILDISGDDSQYEKMRNRVMGALRKHFRPEFVQRIDDLIIFHALGRKQMGDIARIQLKRVEGLLADQK ISVEITPAACEKLVEIGYDPMYGARPIKRAIQREIENPLATKILENTFVPGDTIIIDRDPNGLTFSKKAVVKVSSSANTV QVIESAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-165 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Riv7116_1560 | YP_007054667.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 3e-113 | 43 |
| Riv7116_1560 | YP_007054667.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 6e-113 | 43 |
