Gene Information

Name : Riv7116_2787 (Riv7116_2787)
Accession : YP_007055833.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3438455 - 3438763 bp
Length : 309 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGCCTATAGCAGTTGGAATGATTGAAACCAAAGGTTTCCCAGCAGTCGTGGAAGCTGCGGATGCGATGGTGAAAGCCGC
TCGCGTTACCTTGGTTGGTTATGAAAAAATCGGTAGTGCCCGCGTGACAGTAATTGTTCGGGGAGATGTTTCTGAAGTAC
AAGCTTCAGTTGCAGCAGGAATCGAAGCCGCTAGAAGAGTTAACGGTGGTGAAGTAGTTTCCACTCACATTATTGCTCGT
CCCCATGAGAACCTGGAATATGTACTACCAATTAGGTACACCGAAGCAGTGGAGCAATTCCGAACTTAA

Protein sequence : 
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEAARRVNGGEVVSTHIIAR
PHENLEYVLPIRYTEAVEQFRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-19 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 55
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-18 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2787 YP_007055833.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 1e-19 59
Riv7116_2787 YP_007055833.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 4e-18 55
Riv7116_2787 YP_007055833.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-18 52