Gene Information

Name : Riv7116_2788 (Riv7116_2788)
Accession : YP_007055834.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3439123 - 3439467 bp
Length : 345 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGTCGATTGCAGTCGGAATGGTTGAAACTCTGGGTTTTCCAGCGGTTGTAGAAGCAGCAGACGCGATGGTGAAAGCCGC
TCGTGTTACCTTGGTTGGATACGAAAAGATTGGTACCGGAAGAGTTACCGTTATTGTTCGAGGAGACGTATCTGAAGTCC
AAGCTTCAGTTGGAGCAGGAATCGATTCAGTAAAGCGAGTAAACGGCGGACAAGTATTATCTACCCATATCATTGCTCGT
CCTCACGAAAACCTCGAATACGTTCTACCGATTAGATATACCGAAGATGTAGAACAATTCCGGGAAAATGTGAACGCAAT
TCGTCCTTATGGTGGTAGACCGTAA

Protein sequence : 
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGTGRVTVIVRGDVSEVQASVGAGIDSVKRVNGGQVLSTHIIAR
PHENLEYVLPIRYTEDVEQFRENVNAIRPYGGRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-16 49
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 49
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_2788 YP_007055834.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 4e-16 49
Riv7116_2788 YP_007055834.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 2e-17 49
Riv7116_2788 YP_007055834.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-16 47