Gene Information

Name : Riv7116_5580 (Riv7116_5580)
Accession : YP_007058496.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7014366 - 7014716 bp
Length : 351 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGCCACTACAGGCAGTTGGTGCTTTAGAAACTAAAGGTTTTCCTGCCGTATTAGCAGCGGCGGATGCAATGGTAAAAGC
GGGTAGAGTTACCCTTGTCGGCTATATAAGAGTTGGTAGTGCCCGATTTACAGTTAATATTCGCGGTGATGTTTCGGAAG
TTAAAACTGCTATGGCAGCCGGTGTTGAAGCCGCCGAAAGCTGTTATGGCGGTACTCTTGAATCTTGGGTAATTATTCCT
CGTCCCCATGAAAACGTTGAAGCTGTCTTACCGATTGCTTATTCAGAAGCAGTTGAAGAATATCGACTTGCTGTGGAAAA
TCCAGTTATAGGCAGGTCGAATGGTCGTTAA

Protein sequence : 
MPLQAVGALETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVSEVKTAMAAGVEAAESCYGGTLESWVIIP
RPHENVEAVLPIAYSEAVEEYRLAVENPVIGRSNGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-07 47
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-08 43
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_5580 YP_007058496.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 3e-07 47
Riv7116_5580 YP_007058496.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 4e-08 43
Riv7116_5580 YP_007058496.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-08 41